Lactiplantibacillus pentosus: BB562_13020
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Entry
BB562_13020 CDS
T05251
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpg
Lactiplantibacillus pentosus
Pathway
lpg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB562_13020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpg03400
]
BB562_13020
Enzymes [BR:
lpg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BB562_13020
DNA repair and recombination proteins [BR:
lpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BB562_13020
Prokaryotic type
BB562_13020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUI79535
UniProt:
A0A241RMN6
LinkDB
All DBs
Position
complement(2850517..2851209)
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AA seq
230 aa
AA seq
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MKAFIHTDWWDVLKPEFEKPYYHQLHEFLKNEYRTKNIHPDMYNIFQAFEWTPFADTKVV
ILGQDPYHGPGQAHGLSFSVLPGVAVPPSLGNIYKELQDDVGCTPVEHGYLESWAKQGVL
LLNSVLTVQNGVAFSHAGKGWERLTDVAIQRLSERETPVVFILWGKAARSKIKLINTQTN
VVLQAPHPSPLSAYRGFFGSKPFSKTNIALTSFGEQPINWQLPEHVNLEH
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtttattcatacggactggtgggacgtcttaaaaccggagtttgagaagccc
tattaccaccaattgcacgaatttttgaaaaatgaataccgaacgaaaaatattcacccg
gacatgtacaatatttttcaggcctttgaatggacgccatttgctgacacaaaggtcgtt
attttaggtcaggatccgtatcatggtcctggtcaggcgcacggattgagcttctccgtg
ctacccggagtggcggtaccgccatcattaggcaatatttataaagaattacaggatgat
gtcggctgtacaccggtcgagcacgggtacttagagagctgggccaagcagggcgtgttg
ttgttgaactccgtcttaacggtccaaaatggggtcgctttttcacacgcgggcaaaggc
tgggaacggctaacggacgttgccattcagcggttatcagaacgggagacgccggtcgtc
tttattttgtggggcaaggcagctcgttcgaaaatcaaactgatcaacacgcagaccaac
gtggtgttacaagcaccgcatccgagcccgttatcagcttaccgtggctttttcggttcg
aagccattttccaaaacgaacattgcgttaacatcctttggcgagcagccaattaactgg
cagttaccagaacacgtcaatctcgagcattaa
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