Lactiplantibacillus plantarum ST-III: LPST_C1424
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Entry
LPST_C1424 CDS
T01324
Symbol
rluD1
Name
(GenBank) pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lps
Lactiplantibacillus plantarum ST-III
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lps03009
]
LPST_C1424 (rluD1)
Enzymes [BR:
lps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LPST_C1424 (rluD1)
Ribosome biogenesis [BR:
lps03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LPST_C1424 (rluD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF4784_N
Motif
Other DBs
NCBI-ProteinID:
ADN98640
LinkDB
All DBs
Position
1545853..1546776
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AA seq
307 aa
AA seq
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MAGATTEQQFTITDQTGRLDKVLAALQSVWTRSQVDKLIKTDQVTVNGQLEASKYHVKPG
DEIVVAAQTVQQTTIEPENIPLDIVYEDDDVLVVNKPQGMVVHPAPGHPNHTLVNALLYH
SPLSTINGEFRPGIVHRIDKDTSGLLMVAKNDRAHQSLAAQLKAKTNLREYVALVHGVIK
EDTGTINAPLGRSPKDRKKQAIVKTGRPAVTHFKVLKRYQHYTLISCRLETGRTHQIRVH
LQSIGHPLVGDPLYGPKKTIKGHGQFLHAKLLGFKHPVTGDLLTFEAPLPPIFTTTLAKL
DKTDGNH
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggagcgaccacggaacaacaattcacgattactgaccaaacagggcgcttggat
aaagtgttagcggcactacagtcggtctggacgcggtcgcaagttgataagctgatcaaa
acggatcaggtgacggtcaatggtcagctcgaggcgagcaagtatcacgtcaaaccaggt
gacgaaattgtcgttgccgcacagacggttcaacaaacaacgattgagccagaaaacatt
ccattagacattgtttatgaagacgatgacgtcttggttgtcaataaacctcaggggatg
gtcgtgcatccagcccctgggcaccctaaccataccttggtgaatgccttgctgtatcat
agtccgttgtcgacgatcaacggtgaatttcggccaggaatcgttcatcgcatcgataaa
gatacatccggattattgatggtcgcaaagaatgaccgggctcaccaatcgttagcggcc
cagctgaaggcgaaaactaacttacgagaatacgtcgcactcgttcacggagtgattaaa
gaggatacggggacaattaatgcgccactcggtcggtcaccgaaggatcgcaaaaagcaa
gccatcgttaagaccgggcgaccagcagtcacccattttaaagtactgaaacgttatcag
cactatactttgattagttgccggctggagactggccgtacgcatcaaatccgcgttcat
ttacaatctattggacatccgctggtgggcgatcccctgtacggccccaaaaagacgatt
aaggggcacggtcaatttttacacgccaaattattgggattcaagcaccccgtaacgggt
gacttattgacctttgaagcaccactaccaccaatctttacgacaaccttggctaagctt
gacaaaaccgatgggaatcattaa
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