Lactobacillus paragasseri: LpgJCM5343_04200
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Entry
LpgJCM5343_04200 CDS
T05840
Symbol
rnhD
Name
(GenBank) Holliday junction resolvase
KO
K07447
putative pre-16S rRNA nuclease [EC:3.1.-.-]
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpw03009
]
LpgJCM5343_04200 (rnhD)
Ribosome biogenesis [BR:
lpw03009
]
Prokaryotic type
rRNA processing factors
LpgJCM5343_04200 (rnhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvX
SecD_1st
Motif
Other DBs
NCBI-ProteinID:
BBD48067
LinkDB
All DBs
Position
450304..450735
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AA seq
143 aa
AA seq
DB search
MRLLGLDVGSKTVGVAISDPLGITAQELETIKIDESKFSFGMRQIRKIVRKYDVEGFVLG
LPKNMDGSSGHSVERSKQYGERLKEKFDLPVHYMDERLTTVQADRILVQEAGVHDRVERK
KVIDQMAAVLILQSYLEATRKDK
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcgattacttggactggacgttggctctaagactgtgggggtcgcaattagcgatcct
ttgggaatcactgctcaagagcttgaaacaatcaaaattgacgagagcaagtttagtttt
ggcatgcgtcaaatcagaaagattgtccgtaaatatgacgtcgaaggttttgttttaggg
ctacccaaaaatatggatggcagtagtgggcattctgtagaaagaagtaagcagtacggt
gaacgcttgaaagagaaatttgacttgcctgttcattatatggatgagcggcttacaacc
gtacaagctgatcgtattctagttcaagaagctggcgtacatgatcgtgttgaaagaaaa
aaagttattgaccaaatggctgctgttttgattttacaaagttatctagaagcaaccaga
aaggataagtaa
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