Lactobacillus paragasseri: LpgJCM5343_13690
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Entry
LpgJCM5343_13690 CDS
T05840
Symbol
trmA
Name
(GenBank) TrmA family RNA methyltransferase
Organism
lpw
Lactobacillus paragasseri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_31
N6_N4_Mtase
Met_10
Methyltransf_15
MTS
PCMT
PrmA
RrnaAD
ACT_5
Methyltransf_5
DOT1
Motif
Other DBs
NCBI-ProteinID:
BBD49016
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Position
1409538..1410917
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AA seq
459 aa
AA seq
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MTKFIKNKQEKDIIITIKRLGINGEGIGYYKKKIIFIPGALPGEVVVAKIIDRHPHYLEG
ELVRIKEKSPDRVAFPKGVNPAVGGLELAHLSYPKQLEFKQHLILESLRKYHPRDYIKYK
VKKTISAPNAWHYRNKAQYQIEFNKGKSKLGLYAPNSRRLIDLPEMPTQTKETQKTEREI
KKLIDKLHIRIADFRRHNDGIKTIVVRQSHASGEIQVTLITIGKKIRDLKLLASQIMKLP
NVVSVFQNETQWQNPQVWGNKTIKLFGKSHIIEEILGKKFKLSPRAFFQLNPEQTSTLYS
EALKYLDLTPDQTLIDAYAGVGTLGILASDQVRQVIGIESIPEAVIDAQENCHLNHVRNA
EYIQGNVEKLLPELKNQGVPIDALIVDPPRTGLSKKLIKTLLEVKPETFVYVSCNPATLA
KDLVLLSEAYDVRVIQPVDMMPQTPRWEGVTKLVLRKNK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaatttattaaaaacaagcaagaaaaagatattattatcactattaaacggcta
ggtattaatggtgaagggatcggatattataaaaagaaaattatttttattcccggtgct
cttccaggtgaagttgttgttgcaaaaatcattgatagacacccacattatttagagggc
gaattagttcgaattaaagaaaagtctccagatagagtggctttcccgaagggcgtaaat
ccggccgttggcggcttagaattagctcatctttcttatccaaaacaacttgagtttaag
caacacctaattctagaatctcttagaaaatatcatccaagagactacattaagtataaa
gtcaaaaagactatttcagctccaaatgcctggcactatcgcaataaagctcaataccaa
attgaattcaataaaggaaagagtaaacttggcctgtacgctcctaactcacgtcgttta
attgatcttcctgaaatgccaactcaaacaaaagaaacacaaaaaacagagcgtgaaatt
aaaaagttaatcgataaacttcatattcgaattgctgactttagacgtcataatgatggt
attaaaactattgtagttcgtcaaagccatgctagtggggaaatccaagtaactttaatt
acaattggtaaaaaaattagagaccttaaattactagccagccaaattatgaaacttcct
aatgtagtttctgtttttcaaaatgaaacacaatggcaaaatcctcaagtttggggcaac
aagacaattaaattgtttggaaaatcacatattatcgaagaaatactaggtaagaaattt
aaactctcacctcgtgcatttttccagttaaatccagaacaaactagtacgctttattca
gaggcacttaaatacctagacttaactccagatcaaactttaattgacgcttatgctggg
gttggtactctagggattctagcaagtgaccaagttagacaagtcattgggattgaatct
attcctgaagctgtaattgatgcccaagagaactgccacttgaatcatgtgagaaatgca
gaatatattcaaggaaatgttgaaaagttacttcctgaattaaaaaatcaaggtgtccca
attgatgctttgatcgtcgatcctccacgtacaggattaagcaaaaagttaattaagact
ctacttgaagtaaaaccagaaacctttgtttatgtttcttgtaacccagctacacttgca
aaagatttagttcttttaagcgaagcttacgacgttcgcgttattcaaccagttgatatg
atgcctcaaactccacgctgggaaggtgttacaaaattagttttaagaaaaaataagtaa
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