Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1240
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Entry
LRHK_1240 CDS
T01961
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase family protein
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra00270
Cysteine and methionine metabolism
lra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LRHK_1240 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lra03000
]
LRHK_1240 (dcm)
03032 DNA replication proteins [BR:
lra03032
]
LRHK_1240 (dcm)
03036 Chromosome and associated proteins [BR:
lra03036
]
LRHK_1240 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lra02048
]
LRHK_1240 (dcm)
Enzymes [BR:
lra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LRHK_1240 (dcm)
Transcription factors [BR:
lra03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LRHK_1240 (dcm)
DNA replication proteins [BR:
lra03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LRHK_1240 (dcm)
Chromosome and associated proteins [BR:
lra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LRHK_1240 (dcm)
Prokaryotic defense system [BR:
lra02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LRHK_1240 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AER64026
LinkDB
All DBs
Position
1175450..1176697
Genome browser
AA seq
415 aa
AA seq
DB search
MKQNIIDLFSGAGGLTEGFRRPEYNILAHVEMSVDACQTLRLRDDYYQLKKRNMLQQYRN
FLDGKISLSELEQQCGLRQKALTINETIDTGTIDGILAKIDSKLSNRQVHGIIGGPPCQA
YSTVGRKRNEAKKETDKRIYLYRFYIQFLEHYKPEFFLFENVRGLLSFKDLDGKRLFPKM
KQEFEAITDKLGYHIDWKLIDCSEFGVPQERKRIILYGQRNDLPKFSFFERLADLQETPG
TVGELFRDLPKLKAGETCNKYSKAQPCAFVVENLRTPASKLTQNVARPNRELDLKIYKIA
AEKRAKHKILHYNDLPEDLQTHNNKKAFLDRFKAVPADGVSQTVVAHIAKDGHYYIHPDV
EQNRSITVREAARIQTFPDDFYFMGSRTQAFKQIGNAVPPYLAKKMAQTILLNKQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaacatcatagacttgttttcgggcgcaggaggacttactgaaggctttcgg
cgccctgaatataatatcttggcgcacgttgaaatgagtgttgatgcctgtcagacactg
agattacgagatgactattaccagctgaagaagcgtaacatgcttcagcaatatcgcaat
ttcctggatggaaaaatttcactttctgaactggaacagcagtgtggattacgccaaaaa
gctttaacaatcaatgaaacaattgatacgggtactattgacggaatattggcaaagatc
gactcgaagctttcgaacagacaagtacatggaattatcggtggaccaccgtgtcaagct
tactctacagtgggaaggaagcgtaatgaggctaagaaggaaactgacaagcgaatttat
ttgtatcgcttctatattcagtttttggagcattacaagccggagtttttcttgttcgag
aatgtgcggggacttctttctttcaaagatttagatggtaagcgactgtttccaaagatg
aagcaagagttcgaggcaatcactgataaactaggctaccatattgattggaaactaatc
gattgttccgaatttggcgtcccccaagaacgaaagcgtattattctttatggacagcga
aatgatctgccgaagttttctttctttgaaagacttgcagatctgcaagaaactcccggg
actgttggtgaactcttcagggatttaccaaagctgaaggccggagagacctgtaacaaa
tattccaaggctcaaccgtgtgcttttgttgtggaaaatcttcgcactcctgcaagtaag
ctaactcagaacgttgcccggcccaatcgggaattggatctaaaaatctacaagattgca
gctgaaaagagagcaaaacataaaattttgcattacaatgacttgcccgaagacctacag
actcacaataataaaaaggcatttttagatcgtttcaaagcggtaccggcagatggggtc
tcacaaacagttgtagctcatattgctaaagacgggcattactacattcatccagatgtg
gagcaaaatcgttcgattacagtaagagaagcggcacgtattcagacattcccggatgat
ttctatttcatgggttcacgaacgcaggcctttaagcaaataggcaatgcagttcctccc
tacctagctaagaaaatggcgcaaacgatattactaaacaaacaatga
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