Labeo rohita (rohu): 127163144
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Entry
127163144 CDS
T09007
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127163144 (recql5)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127163144 (recql5)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127163144 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
ResIII
TFIIS_M
EloA-BP1
KIX_2
SRI
Motif
Other DBs
NCBI-GeneID:
127163144
NCBI-ProteinID:
XP_050962163
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All DBs
Position
3:33864604..33900606
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AA seq
970 aa
AA seq
DB search
MSAVHRALQTHFGFDKFRSQQQEDAVKAVLKGDRDVFVLMPTGAGKSLCYQLPALLASGI
TLVISPLIALIQDQVEHLKALNVPARSINSKLPSAERREILADLESESPRLKLLYITPEM
VASPSFQPCLNSLCARGLLAYLAVDEAHCVSQWGHDFRPDYLKLGDLRSRLQGVPCVALT
ATAPKRVQEDIERSLKLRSPLVFATPVFRKNLKYDVIFRDLLPDPYVHLFAFAKEALGGN
TAEKGCGIVYCRTRESCEEVAHKLTKLGILAKPYHAGLKAGDRTESQTDWMADKVPVIVA
TISFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGLPSSCRIYYSPKDRDQLNFLI
RKEIARKQEKRGSEKEQDKAPILDFEAMVAFCEQEGCRHATISQFFGNQKPNCAGACDFC
RDPKIVRAQLARAAALSTRTGPAQSTAPRGPFGFDPELYAGGKKGYGFERYDEEWGNEED
DSEKRKKVFGDLFKKQMSLRKGSDVAKEKFVPPDADCMLKDASSQRIPKLTVKSREHCLS
LLQECLTNHRGAAELSYSSDTIDQAVEIEHEIFRASKSANLYKAAVLKRVSEMKKSTTAS
VAEEKQPESTEETATCSSSYQSEHLDGFTSASQVYSLKRKRIGAGFRGSSSLFQTAGDFL
KNSQKETDKTPGDPICEEKEEVETGKAQKMKSGLATPADSSPIKAKTSTTSSLSSPSKKL
TKKQQKLAEAAKDMRCISQYFGKKQVDTTQTKTGSAISEPEEEGSENRSPLPNDTDFITI
NSMPTDVENTSENVTAVHMSPSAEEMPNQDETPMDTEITSNQDVQGENHEPDAQQKSPKQ
SHEDRTPSPPVKRSRALKDIKRVTFDPVVQETQFEAVNGDTTEIKKPVTLKEAADIVVRC
LDPFYKKGKFATKDLFKSFARFLSHLLTEGKTANRGQVKMEAKRLIKGFFSRIQRCESET
DWKHLKVEDR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttcaccgggccttacaaacacacttcggattcgacaagtttcgatctcag
cagcaggaagatgccgtgaaagctgtgctgaagggtgacagggatgtgtttgtcctcatg
cccactggagcgggtaaatctctgtgctatcagctcccagccctcctggccagtggcatc
actctggtcatctcgcctctaatcgcgctcatccaggatcaagtggagcacctgaaagct
ctgaatgttcctgcacggtccatcaactccaaactgccctccgctgagcgccgtgagatc
ctggcggatctggagagcgagagtcctcggctcaagctgctctacatcactccagagatg
gtggcgtccccgtccttccagccctgcttgaactcgctgtgcgcgcggggcctgctggcg
tatctggctgtggatgaggctcactgcgtctctcagtggggtcatgacttcagaccggac
tacctgaagctcggggacctgcgctcccgtctgcagggggttccctgtgtagcgctgacg
gccacagcacccaagagagtgcaggaagacatcgagcgctcgctgaagctgcgctcaccg
cttgtctttgccacacctgttttccgtaaaaacttaaaatatgacgtcatattccgtgat
ctgttgcctgatccttacgtccacttatttgcctttgctaaagaggcgctgggtggaaac
acagctgaaaagggctgtgggattgtttactgtcgcaccagagagagctgtgaggaagtg
gcacacaagctgactaaactaggaatcttagccaaaccctaccatgcagggttgaaagcg
ggcgatcgcacagagagtcagactgattggatggccgacaaagtgcctgttattgtggcc
acaatcagtttcggtatgggagtggacaaggccaatgtcaggtttgttgtccactggaat
ctggcgaagtctttggccagttactatcaggagtcgggacgagctggacgtgacggactg
ccgtcgtcctgcaggatatactactcacccaaagacagagaccaactcaacttcctcatc
cgcaaagaaatcgcccgcaaacaggaaaagcgaggatcagagaaagagcaggataaagct
cccatcctggactttgaggccatggttgctttttgtgaacaagaagggtgcagacatgcc
accatctcacagttttttggcaatcagaagcccaactgcgctggcgcgtgtgacttctgc
cgtgaccctaaaattgtgcgcgctcagctggcgagagcagccgccctcagcaccagaacc
ggaccggcacagagcacggcacccagggggccgttcggctttgaccctgaactctacgcg
ggaggcaagaagggttacgggtttgagagatatgatgaggaatggggcaatgaagaagat
gactccgagaagaggaagaaagtgtttggagatctcttcaagaaacagatgagcctgaga
aagggttcagatgtggcaaaagagaagtttgttccaccagatgctgactgcatgttgaag
gatgccagcagtcagagaatccctaaactcacagtgaagagcagagagcactgcctgtct
ctcctgcaggagtgtctgaccaaccacaggggggcagcagagctttcatacagctctgac
acaattgatcaggctgtagaaatagagcatgagatcttcagagccagtaaatcagcaaac
ctctacaaggctgcagttctcaagagagtgtcagagatgaagaaaagtacaactgcaagt
gttgctgaagagaaacagcctgaatcaactgaagaaacggcgacctgctcatcatcgtat
caatctgaacatctagatggcttcacttcagcctctcaagtctactcactgaagaggaag
cgtataggagcaggatttcgtggctcatccagcctgtttcagacagctggggattttctg
aagaactctcagaaggaaacggacaaaacacctggagaccccatctgtgaagaaaaggag
gaggtggaaacaggaaaagcacagaagatgaaaagtggtttagcaacccctgccgactcg
tctcccatcaaagccaaaaccagcacgacatcctctctgagcagccccagtaaaaaactc
actaagaaacagcagaaactagcagaagcagccaaagacatgcgctgtatatcacaatat
tttggaaaaaagcaagtagacaccactcagacgaaaacaggaagtgctatatcagagcct
gaggaggaaggatctgagaatcgctctcctttaccaaatgacactgactttataacaata
aatagcatgcccacagacgtagaaaacacttcagagaatgttactgcagttcatatgagt
ccctctgcagaagagatgcccaatcaagacgagacgcccatggacactgagatcacatca
aatcaagacgttcaaggagagaatcatgagcctgacgcccaacaaaaatcaccaaaacaa
tcacacgaagacagaacgccgtctcctcctgtaaagcgcagccgcgcgttaaaggacatt
aagagagtgacctttgaccctgtggtgcaagagacgcagtttgaggcagtgaatggagac
actactgagatcaaaaagcctgtgacacttaaggaagctgctgatatcgtggtgcgatgc
ctggatccgttctacaaaaagggcaaatttgcaacaaaggatttgttcaaatcctttgcc
cgtttcctttcccatcttctcacggagggaaagactgcgaatcgaggccaagtgaagatg
gaagcaaagagactcatcaagggcttcttcagcaggattcagcgctgtgagagcgagaca
gactggaaacacttgaaagtcgaggacagatag
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