Labeo rohita (rohu): 127169510
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Entry
127169510 CDS
T09007
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127169510 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127169510 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127169510 (itgb4)
04810 Regulation of actin cytoskeleton
127169510 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127169510 (itgb4)
04515 Cell adhesion molecules [BR:
lroh04515
]
127169510 (itgb4)
04090 CD molecules [BR:
lroh04090
]
127169510 (itgb4)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127169510 (itgb4)
Exosomal proteins of bladder cancer cells
127169510 (itgb4)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin beta subunits
127169510 (itgb4)
CD molecules [BR:
lroh04090
]
Proteins
127169510 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Pur_ac_phosph_N
Integrin_B_tail
Calx-beta
PSI_integrin
I-EGF_1
EGF_2
SEA
I-set
Motif
Other DBs
NCBI-GeneID:
127169510
NCBI-ProteinID:
XP_050972900
LinkDB
All DBs
Position
8:complement(27729437..27762932)
Genome browser
AA seq
1930 aa
AA seq
DB search
MGGWALRLAVGIYVLMLAVTASRANEVNHCTAARAKTCSECIRIGTGCAYCPDEIFEYER
CDLKENLQARKCSERMVTIQSSKKTEKNLQINKSLKYSQVAPQLMSMTLLPGEEKEVEME
VFEPARGPLDLYILMDFSNSMSDDLDNLKRMGDQLAQLVGNLSDDYTIGFGKFVDKVTEP
QTDMRPAKLAEPWANSDPPFSFRNVITLTSNIDTFRQKLQRERISGNLDAPEGGFDAILQ
TAVCQKQIGWRDDSTHLLVFSTESAFHYEADGANVLAGILDRNDEQCHLTPDGNYTHDIR
QDYPSIPTLVRLLVKHNIIPIFAITNHSYSYYKKLSEYFPIAELGQLQEDSANILNILEK
AFENIRSKISIRAEDRPKAIEAKILSQSGTFSEFGSFKITPGEIGKFRVSLKALTHVGEE
HVCNANQADRAGTLRVKPTTFSSAFKINTEVLCHTCDCEKTPVQNAARCNAHGDLVCGKC
QCYDGWLGPFCNCTAGTSKDSKDTCTEPGKSNPCSSRGDCMCGTCVCYNPNQFEGPFCQF
DKSQCQRFGGFLCNERGSCSMGRCVCAPGWTGSACECPISNQTCLDSKGGICNGRGVCKC
GRCECEHSGLPLSPTCEANFQQQLGMCEAKRSCVQCQAWNTGERKGQKCKECSFKIVMVE
ELEEENKNVIETCSFRDEDDDCTYHYTVNYPLDITDKEHHVLVKKKKDCPPAGFLWLIPL
IMFLMLLLGLLLLCCWKYCACCQSCLALLPCCGRGRMVGFKEDHYMLRQSLLTSDHLDTP
MVRTGPPKSTDIVRWKVADNVHRGPNHPQNQIKPNPKETIQYPVSLRLNRQYSETLSNPE
ARDTDMLRREVEDNLNDVFLQIPGAQRVQKTRFRTQRNSGKRQNNTIVDTVLSAPRASYP
DIVKLTDKQVQAGNFQDLKVVPGYYTVATDREAAGAVEFQEGVESVDVRVPLFIKDEDDE
KKELLVQAVDVPVGIAKIGKDHVNITVIKEHARSIFTFLQPSYTYSRQDGVANIPISREI
IEDGRTQVTYCTRDLTAKDKKDYISVDGDLSYAPGETQKTVPVKLLELGEGDGLLEDKQV
KQFVMDLSNPRQGAKLGRYPRTTITIADKPEPSVVMFKKSTQTYNTTDPLYSIPVVRTRS
QEGPTTVYWRTNKASRFDLSSPLKFAPGETEKNIVIDPRSYPSPIVPETFQLELFDPSNN
AVIGERKTSVVNVIDGRGDGQMDFQKMEYVNQSATSPGGRLYSPTNIKAIATGPKNIRMI
WNPSPNANGYKVKYWIYGDPEADAQVLDVKTPQAELTNLYPYCDYEMRVCGYNALGEGNY
SDVIQCQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGVITAYEVIYTPIDEDKKPI
GPSKKVMIDNPKKRMLLIENLQPSQTYCYKVRARNKVGWGPYRDATINLATQPTRPMSIP
IIPDIPIVDAEAGDEYESYLMYSNEVLRSPTGSQRPSVTDLTDDQFVNGKWDQNFLFPGG
SSSLSRNVSTSSSTYSHSTPRPGVTNHSSTTTYISGKGGSTTHTYDLRDGGLLTEEVIMR
KRSDNRHYTDSDGVRDSIVMGNLSGGILDKLGLSSFSQSTTTSYSLSSRARTQSEDINDA
LQNLDSVLQDSRFNPGVPETPSRLVFSALGPTALKVSWQEPHCETDVLGYCVLYQLLSGG
EVKRIEVKNPAQNSVMVQDLLPNHSYIFKVKAQSREGWGPEREGVITIESAVDPKSPLSP
MPGSPFTLSTPSAPGPLIFTALSPDTLQLSWEKPRKPNGDILGYVVTCEQLHGGGDLRSF
QVNGNAATSLTVSDLKENMPYKFKVQAQTTQGFGPEREGIITIESQDGGSMSQYSSHSLT
KREVFNLPTEITSHSMFSEPFVSPDGMMMMSSRQITESGGTITRQVEMVQRGVMSSSTIT
KKVERQYYEA
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgggaggatgggcgctgcgtctcgctgtggggatctacgttctcatgctcgctgtgaca
gccagccgtgctaatgaggtgaaccactgtaccgctgccagggcaaaaacctgttcagaa
tgtatccggatcggcacaggatgtgcttactgccccgatgagattttcgagtatgagcgt
tgcgacctgaaggaaaacttgcaggcccgtaagtgtagtgagcgtatggtaacaattcag
agcagcaaaaaaactgaaaagaatctgcaaatcaataaatcattgaagtactctcaggtg
gcccctcagctcatgagcatgacgcttctccctggtgaggagaaggaagtggagatggag
gtgtttgaaccagcccgtggccctctggacctctacatccttatggacttctccaactct
atgtctgatgatctggacaacctgaagaggatgggagaccagctggctcagcttgttggc
aatctgtctgacgattacaccatcggatttggcaaatttgtggacaaagtcaccgagcct
cagacagacatgagaccagccaaattagcagagccgtgggccaacagtgaccctccgttt
tcattccgtaacgtcatcactctcaccagcaacattgacacctttagacagaagcttcag
cgagagcgcatatctggcaacctggatgcccccgaggggggtttcgatgccatcttacaa
accgctgtctgccagaaacaaattggctggagggatgacagcacccacttgctggtcttc
tccactgaatcagctttccattatgaggcagacggtgccaatgttctcgcgggcatcttg
gatcgtaacgacgagcagtgccatctgactccagatggaaattacacacatgatattcgt
caagactacccatctatacccaccctagtgcgacttctggtgaaacataacatcattcca
atcttcgccattactaaccactcctactcttactataagaaactttctgaatacttccca
attgctgagcttggacagttacaagaagattccgccaacatcttgaacattttagaaaaa
gcttttgagaatattcgttccaagatcagcatccgtgcagaagacagaccaaaagcgatt
gaagccaagatactctctcagtccggcactttctctgaatttggcagtttcaaaatcaca
ccaggcgaaattggtaaatttagagtcagtctgaaggctcttactcatgtgggagaggag
catgtgtgtaatgccaaccaggctgaccgtgcaggaaccttaagagtcaaaccaaccacc
tttagctctgccttcaaaatcaacactgaagtgctctgtcatacatgtgactgcgaaaag
accccggttcaaaatgcagcacggtgtaacgcccatggagatcttgtctgtgggaaatgc
cagtgttacgatggatggctaggcccattctgtaactgtacagcggggacctccaaagac
tccaaagacacgtgcaccgaacctggaaagtccaacccttgctcaagcagaggagactgc
atgtgtggaacctgtgtgtgctataacccaaaccagtttgaagggcctttctgccagttt
gacaaatctcagtgccagagatttggaggatttctctgtaatgaacgtggaagttgcagc
atgggaagatgcgtttgtgcaccaggatggactggaagtgcctgtgaatgtcccatcagc
aatcaaacatgtctggacagcaaagggggcatctgtaatggccgtggtgtgtgtaaatgt
ggccgttgtgagtgtgaacactccggacttccactgagccctacttgtgaagcaaacttc
cagcaacaattgggtatgtgtgaagccaagaggagctgtgttcagtgccaggcctggaac
accggcgagagaaaaggacagaaatgtaaagagtgttcctttaaaatcgtcatggtggaa
gagcttgaagaagaaaataaaaacgtaatagagacgtgcagtttccgtgatgaagatgac
gactgcacgtatcactacactgtgaattatccattagacatcacagacaaagaacaccac
gtcctagtaaagaaaaagaaagactgtccacctgcaggttttctgtggttgattcctctc
attatgtttctgatgctattacttggtttgcttttgctctgctgctggaaatactgcgcc
tgctgccagtcgtgtcttgctcttctcccatgctgtggcagaggtcgtatggtgggattc
aaagaagaccactacatgctgcggcagtctttgttgacctctgatcatctagacacccca
atggtgcgcaccggcccacccaagagcacagacattgtgcgctggaaagtagcagacaat
gttcatcgaggaccaaaccacccacagaaccaaatcaaacccaaccccaaagagaccatc
cagtaccctgtctctcttcgtctgaaccggcaatattcagaaactctatccaaccctgag
gcccgggacacagacatgctcaggcgagaagtagaggacaacctcaatgacgtgttcctg
cagatccctggcgcacagagagtgcaaaagactcggtttaggacacaaagaaattctgga
aagagacagaacaacacgattgtggacacggttttatctgcccctcgtgccagttaccca
gatattgtgaaactgacagataaacaggttcaggctggaaacttccaggacctgaaggtg
gttccaggctactacaccgtagctactgacagagaagcggcaggtgctgtggagtttcag
gagggcgtggagtcagtggatgtccgggttcccctctttatcaaagatgaggatgatgaa
aagaaggagctgcttgtgcaagccgttgatgttccagtaggaattgcgaagatcggcaaa
gatcacgtcaacatcactgtgattaaggaacatgcaaggagcatcttcaccttcctgcag
ccgtcatacacctacagtcgtcaggatggtgtggcgaacatcccgatcagtcgtgaaatc
atagaggatggacggacacaggtcacatactgcacccgtgacctcactgccaaagacaag
aaggactacatctcagttgatggagatttgagctatgcaccaggggaaacacagaagaca
gtcccggtgaaacttttggagcttggggagggagatggactgctggaggacaaacaggtc
aaacagtttgtgatggatctgagcaacccacgacaaggggctaaactgggtcgctaccca
cgcaccactatcaccatcgcagataaaccagaaccaagtgttgtgatgtttaagaagagc
actcaaacttacaatacaaccgacccgctctactccatccctgtggtgcgcactcgaagc
caggaaggtccaaccactgtgtactggcgcacaaataaagcctcacgcttcgacctttcc
agtcctctcaaatttgctcctggtgagacggaaaagaacatcgtcattgatcctcgttcg
tatccatctcccattgtacctgagaccttccaactagaactgtttgacccgagcaacaat
gcagtcattggagagaggaaaacctctgtggtgaatgtcatcgatggtagaggggatggg
caaatggatttccagaaaatggaatatgttaatcagtcagccacgtctcctggaggacgc
ctctactctccaaccaacatcaaagctatcgccaccggccctaaaaacatccgtatgatc
tggaaccccagtccaaatgccaatggttacaaggtgaaatactggatttatggagaccct
gaggctgatgcacaggtgctggatgtgaagactcctcaagccgagctgacgaatctctac
ccgtactgcgattacgagatgcgcgtatgtggctacaatgcactcggagagggcaattac
agcgatgtcatccaatgccagactctagaggatgtacctggtgaacctggtcgcttggct
ttcaacgtcatcagccccactgtcactcaggtcagctgggcagagccagcagaaactaat
ggtgtcatcactgcatatgaggttatctacacacccatcgacgaggacaagaagcctata
ggaccttcgaagaaagtgatgattgacaaccccaaaaagcgtatgctgctcattgagaac
ctgcagccttctcagacctactgttacaaagtgcgtgctcgcaataaggtgggctggggc
ccgtacagagacgccacaatcaacctggctacacaacctaccagacccatgtcaattccc
atcattcccgacattcccattgtggatgcagaagctggtgatgaatatgaaagctatctg
atgtacagtaatgaagtactacgatccccgacgggtagccagaggccaagcgtcacagat
ctgactgacgatcagtttgtaaatggaaagtgggatcagaatttcctgttcccgggagga
agcagttccctttcccgcaacgtcagcacctcctcatccacgtacagccattccacaccc
cgtcccggtgtgaccaatcacagcagcacgacaacatacatttctggcaaaggaggctca
actacacacacatacgatcttagggatggcggacttctcacagaggaagtgatcatgagg
aagcgttctgataacaggcattacacagacagtgatggtgtgagggattctatcgtcatg
ggaaacctgtctggtgggattttggacaaattagggctctctagcttcagccagagtaca
actaccagctacagcttgagctccagagctcgtactcagtctgaagatatcaacgatgca
ctgcagaacctggatagtgtgcttcaggactctcgcttcaacccgggtgttcctgagact
ccgagcagactggtgttctctgctctggggcccacagccctgaaagtgagctggcaggag
ccccactgtgagaccgatgtactgggctactgcgtcctttaccagctactcagtggaggt
gaggtaaagcgtatcgaggtgaagaatcctgctcagaactctgtgatggttcaggatctc
ctgcccaaccattcctacatcttcaaagtgaaggcccagagtcgagagggctggggtccc
gagagagagggagtcattaccattgagtctgctgtcgaccccaagagtccactgagccca
atgccaggatccccattcacactcagcactcccagcgctccaggacctttgatcttcaca
gctttgagtccagacacgctgcagctgagctgggagaaaccccgcaaacccaacggggac
atcctgggctacgtggttacctgcgaacagctgcatggtggaggagatcttcgctccttc
caggtgaatggcaacgctgcaacttccttgactgtgtctgacctgaaagaaaacatgccg
tacaaattcaaagttcaggcccagaccacgcagggctttggaccggagcgagagggaatc
atcaccattgaatcccaagatggaggctccatgtcacagtacagcagtcattcactcaca
aagagagaggtgtttaacctaccaacagagattacttcacacagcatgttctcagaaccc
ttcgtgtctccagacgggatgatgatgatgtcaagcaggcagatcacagagtcgggtggc
accatcacgcggcaggtggagatggtacagagaggagtgatgtccagcagcaccatcact
aagaaagtggaacgacagtactacgaggcctaa
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integrated database retrieval system
