Labeo rohita (rohu): 127174674 Help Entry 127174674         CDS       T09007                                  Symbol cdh23 Name (RefSeq) cadherin-23   KO K06813   cadherin 23 Organism lroh  Labeo rohita (rohu) Brite KEGG Orthology (KO) [BR:lroh00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:lroh03037]     127174674 (cdh23)    04515 Cell adhesion molecules [BR:lroh04515]     127174674 (cdh23) Cilium and associated proteins [BR:lroh03037]  Primary cilia and associated proteins   USH complex and associated proteins    127174674 (cdh23) Cell adhesion molecules [BR:lroh04515]  Cadherins   Major cadherins    127174674 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 Cadherin_4 Motif Other DBs NCBI-GeneID:  127174674 NCBI-ProteinID:  XP_050981128 LinkDB All DBs Position 13:29528331..29837191 Genome browser AA seq 3367 aa AA seqDB search MSWCEGSGGKMTLVKLLLSFLLLHTLSEASNQPPRFQNYFFQSYLLIYEDTPVGTSITQL QAIDPDGEPLIYGVVGEEAMRYFAVQGTTGVVWLRQPLDRETKSEMQVEFSVSDSQGVVK DTVNIQIGDVNDNAPSFLNQPYAVQIPENTPVGTSVFMVNATDPDQGVGGSVLFSFQPPS PFFSIDGARGIVTVTRALDYETTTAYQLTVNATDQDKRRPLSSLANLAITITDVQDMDPI FTNLPYSTNIMEDAPPGYEVRKITAIDQDQGRPRGIGYTIISGNTNSMFTLDYISGSLTV SGQLDRENPLYSSGFTITVKATELNDNRTPSSATVMTTFTILLIDKNDNPPRFNSSEYRV LIPELAQVGFALPLYIQVEDKDEGVNSMFQVVLTGNNSEHFSISPTSVQGRADLRVRVAV PLDYENIRSYSFSLYANESLSEHVGFARVFIDLINENDNRPIFSQTLYNISLPESTPPGT SLLQIKATDNDIGTFGVVRYYFSDEPDQFSLDAETGWVTLRDRLDYELMRRFTLTILARD GGGEETTGRLRINVLDVNDNAPVFQKEAYTGSLMENEQAPQQVVRARATDEDSPPNNILT YSITYATQFRSYFSISVVEGYAVITVNRPLDYEQVPGGLIFLTLMAKDGGNPSLNSTVPV TIELFDENDNPPEFSLPSYIVNIPENIVAGATVLFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDREMKSEYILIVRAVDGGVGPQQKTGIATVNITILDINDNAPM WRDEPYQANVVEMSPIDTDVITVLAVDPDYGDNGTVVYSINPENPFYTINRNTGKIRTSG AVLDRESQNARSAQLMRTIIISATDRGTPPLRSSASATVYVNLLDLNDNDPAFLNLPFVA EVPEGLPIGSSVFRVQVQDPDEGDNGAVTMALQMGMPRLDFRLNTTTGVLFSTAVLDREQ IGQYYLRIIAYDAGQFPRTSTSTLTITVLDINDETPTFFPSVYNVSLDENVPRDYVVVRL NCTDNDAGLNAELSYFITGGNQDGKFSVGFRTGVVRTVVSLDRETQASYRLMIEAIDNGP AGGRRTGTATVYVEVLDVNDNRPIFLQNSYETSVLENIPRGTSILQVQATDADQGENGRV LYRILSGNNGQFNVDSLSGLISRGTVALDRETRSSHVLEVEAYNSDMGSMRSSVRVIVYV EDVNDESPVFTQSQYNRLGLRETAGIGTSVVVVRATDPDTGDGGAVAYALVSGSDRKFEV DVSTGLVTTVDYLDYETKTSYLMNVSATDQSPPFHRGYCTVYVTLLNELDEAVAFLSAGY EASLKENIATGTEVVQVKAQSADNLNQLSYRFDPDTSPAALALFKIDSVTGRITVTGLLD REQGDSYTLTVVADDGGPKRDSTVKVSITILDENDNSPEFDITSDLSVDIPEDTPIGKRV AVVLARDKDAGKNGLVNFTLIAGNMQDVFKINTANNTYGEVYLNAHLDREAVDRYLLKVR AMDNGSPPRFTDMSLTVNILDVNDNPPVLQSPRGYNVSVSENVGGGTSVLRVVATDRDIG PNAMLSYYITGGNQDLTFRMDRMTGEIVTRPSPPDREKQQQYTLTVTVEDDGMPPLSTST TVWVRIIDENDNAPEFPEEEYVTELREGPNTVGAIIAKVTAIDPDEELNGTIRYAISKGN LAQTFQINSITGQIVVIKELDYEISNGHYVLTVTATDQCPIPQFRLTSSTTVLVNVVDVN DNAPIFPRAFEGPFEITEGQPGPRVWTVKATDADSGSNGKVEYSITAGDLKNEFVISSVE GELRVRRDVELDRETIAYYNITITAKDLGTPALSAMVVVGIQVLDINDNDPVLLNLPYNT SVSEGAAVYTSITQVRAQDSDSGRNALLTYSITAGNTDGSFYINETSGVVQVNRPLDRER VAEYSLTITVKDNPDNPRIARRDSELLVVTVLDVNDNRPIFTQSNYRGEISENSPTGTTV LILNGPVLAEDKDIGENAVVRYRLLGTRVDLFSIDSRTGVVSVRGGAVLDREAFSVPRVE LFLLGEDVGGLNSTVPLTITILDINDNPPVFNPSSFTVHLPENSPTGVVVTQLSASDADA GSNGWLQYRLDSGAQDRFIVDALSGAVVVGNATLDREERSSYRLVVIATDRGTPPLSGTA TLTVVLDDVNDSRPRFIRPVQTISVNESTPPGEVVATLTAEDPDLRPRLEYYIISVEAKD DGNNPVDGLQQSFGIDFYTGAVFVRNPLNRELVATFEIIVSVHDNASDVIDMSVSVPNAK LTINVLDVNDNAPRFRPFGVANFSESILEGAVPGTTLLSVTAVDPDKGPNGQIIYQLLHL PRGDYIRLEDPSTGKIVANRTVDFEQVQWLNFTVRAQDHGTPPRFAELPVYLRIVDVNDN NPVFQRPLYQKSIFEDVALGTIIVSVSATDADSGLFSVIEYGLVDGEGKFGITPTTGDIY ILSALDRETKDRYTLTAYARDNPGGSPNNRRENSVQVQLTVLDVNDFRPRFSERVFTTSV FENELVGTSVITMKAIDLDEGENALLTYSLQGPGADAFSLDPDTGLIRSLRLLQSFERFN LTVVATDHGRTPLWGTAILQITVIDVNDNRPIFVRPANGTIMHILEEQPPGLVVYEVFAT DEDEGVNGEVRYSFLQTGAGNRDWENFHIDAVTGVITTAVKLDREKQALYSLVVVAYDLG QPVPYETMQPLQVALSDIDDNEPVFLKPPRGSLPYQSLSVPEHSSPGTVVGNVTGAVDAD EGSNAIVYYFIAGGDTEGNFGMSVAGVLRVKKDLDREEIPVYSIIVKASSNRNWSPPRGQ RSQRAQVLDPSRDPTLQEVRIFLEDINDQSPRFTKMEYTAGVAADAKVGSDLIRVQAIDN DIGNNSLVLYHILSIRYIKLHSNDSEDMGNVFIIGETDGIIRTFDLFMAYDPGYFVVEVL ARDLAGHSDVTLVGIYILRDDQRVKIVINEIPERVRLFQEEFINLLSNITGAIVNTDDVQ FHVDKKGRVNFAQTDVLIHVVNKQTNRILDVERVIQMIDENKEQLRNLFRNYNILDVQPA VTARAPDDLTTLQMAIIILAVLLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNQGLMD ILDMPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPEDLSDIADLWNSPARTHGTF GREPQASKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYLRLKKLFAARM VTKSTSHGDQSSVTELIQSDLDEDDDERVGVGGRGTLRFKHKLPIELRGPDGVHAVHGST GTLLTSDLNSLPEDDQRALARSLEALHADGGLYAERNARTESAKSTPLHRNKGSDTLSES PLEITEL NT seq 10104 nt NT seq  +upstreamnt  +downstreamnt atgtcgtggtgtgaaggttctggaggcaagatgactttggtcaagttactcctctccttt ttgctgctacacacactttctgaagcctctaatcagccgcctcgtttccagaattacttc ttccagtcgtacctgctcatctatgaggacacaccagtgggtacgtccattacccagctg caggcgattgatccggacggtgagccattgatttacggtgtggtcggagaagaggccatg cggtactttgctgtgcaggggacgaccggtgtggtgtggctgagacagccgctcgacagg gagaccaagtcagagatgcaggtggagttctcagtcagtgacagtcaaggggttgtgaag gatacagtgaacattcaaattggcgacgtaaatgacaatgcaccatcgtttctgaaccag ccctatgccgttcaaataccagagaacactccagtgggaacgtctgtgttcatggtgaac gcgacagacccggatcagggcgtgggcggcagcgtgctcttctccttccagcctccctct ccgttcttctccattgacggggccagaggaatcgttactgtgacgagagcgctggactat gagacgacaaccgcctatcagctcactgttaatgccacggaccaggataaaaggcgtccg ctttcgagccttgctaatttggcgattaccattactgatgttcaagacatggaccccatc ttcaccaaccttccctacagcactaatataatggaggacgcaccaccaggttatgaagtc cgtaagatcactgcgattgatcaagatcaaggtcgaccacgtggaatcggatatacgatc atatcaggtaacaccaacagtatgttcactctcgactacatcagcggatccctgacagtg agtggacagctggatcgagaaaaccccttgtactcatccggattcaccatcacagttaag gccaccgagctgaatgacaaccgcacgccctcgtctgccaccgtcatgaccaccttcacc atcctgctgatcgataaaaatgacaatccgcccaggtttaacagctctgagtatcgcgtg ctgatccctgagctggcgcaggtcggcttcgctctgcctctgtacatacaggtcgaagac aaagatgagggggtgaacagcatgtttcaagtggtcctgacagggaataactctgagcac ttcagcatctctcccacctccgtgcagggaagagcagacctccgtgtgcgcgtggctgtc ccgctggactacgaaaacatcaggagctacagcttttctctgtatgccaacgagtctctg tcggagcatgtggggtttgctcgagtcttcatcgacctcatcaacgagaacgacaacagg ccgatcttcagccagacgctttataacatcagtttacctgaaagcacccctcctggaaca tctctactgcagataaaggccacggataatgacattggcacgtttggagtggttcggtat tacttcagcgatgagccagaccagttttcattggatgctgagacaggttgggtgactctg cgagaccggttggattatgagctcatgaggcgctttacactaaccatattggcccgtgat ggaggaggggaggagactacgggacgccttcgcattaatgtgttggatgtaaacgacaat gcaccagtcttccagaaggaggcgtatacgggttcacttatggagaacgaacaggctcca caacaagtagtccgagcccgggcgacggatgaggattctcctcccaataacatcctgacc tactccatcacctatgccactcagttcaggtcatatttcagcatcagtgtggtggagggc tacgcagtcatcaccgtgaatcgtcctctggattatgagcaggttccaggtggattgatc tttctgactctgatggccaaagacggagggaacccgtctctcaacagcactgttccagtc accatagagctgtttgacgagaatgataacccacccgagtttagcctcccgtcttacatc gtcaacatacccgagaacatcgttgcaggagcgacagtgttgtttgtgaacgccacagac ctggacgcgtctcgagagtttggtcaggcctccctcatctactccctgcagggcagctca cagttcaggctcaacactcgctcaggagagatcaccaccacagctcttctggatcgagag atgaagtctgagtatattctgattgtaagagctgtggatggaggagtgggaccacagcag aaaaccggcattgctacggtgaacataactattttggacataaatgataacgcccccatg tggcgagatgagccgtatcaagcgaatgttgtggagatgagccccatcgacactgacgtc atcaccgtattagcagtggaccctgattatggtgataatgggacggtggtctactctata aatccagagaaccccttctacactatcaaccgcaacaccgggaagatccgcaccagcggg gcagtgctggacagagagagtcaaaacgcccgctccgcacagcttatgaggaccatcatc atctctgctaccgaccgtgggacgcctccactgcgctcttcggccagcgctacggtgtat gtgaacctcctggacctcaacgataatgatcctgcctttctcaacctcccatttgtcgct gaagtaccagaggggcttccaattggatcatctgtgttcagggtgcaggtgcaggaccct gatgaaggtgacaatggtgcggtaaccatggcacttcagatgggaatgccacggctggac ttcaggctcaacaccaccacaggagtcctgttttccaccgcagtgctggaccgcgagcag atcggccagtattatctaaggattatcgcgtatgacgcgggccagtttcctcgaacatcc acgagtactctcactatcacagttttggacatcaatgatgagacgccaaccttcttcccc agcgtttataacgtatcgttggatgaaaacgtgccccgtgattatgtggtggtcagacta aactgcacggataatgacgcgggtctgaacgcagagctcagctattttatcacagggggg aaccaagatggaaagttcagtgtgggtttccggaccggagtagtacggacagttgtgagt ctggaccgcgagactcaggcctcgtacaggctaatgattgaagccattgataacggtcca gcgggaggtcggaggacaggcacagctacagtatatgtggaggtgctggacgtcaatgat aacaggcctatattcctccagaacagctatgagaccagtgtcctggagaacatacccagg ggaacaagcatattacaggttcaggccacagatgcagatcagggggagaatggaagagtt ctgtacaggattctctctggcaacaatggtcagtttaacgtggacagtctgtctggactc atcagtaggggaactgtggctctggaccgagagacacgcagctctcatgtgctggaggtg gaggcctacaacagtgacatgggcagcatgcgcagctctgtcagggtgattgtgtatgtg gaggacgtgaatgacgagtctccagtcttcactcagtcgcagtacaatcgtctggggctc agagagaccgctgggatcggtacatctgtggtagtggtccgagctacagaccccgacaca ggagatgggggtgctgtagcgtatgctctggtctctggttctgaccgtaagtttgaggtc gatgtgagtacgggtctggtaaccactgtggattacttggactacgagaccaagaccagc tatttaatgaacgtctcagccacagatcagtctccaccgttccaccgtggctactgcacc gtctacgtaactttactgaatgaactggacgaggccgtggcctttctatcggccggttac gaagcgtcgctaaaggagaacatcgccacaggaacagaggtggtccaggtgaaggcgcaa tcggccgataacctgaaccagctgtcgtaccgcttcgatcccgacacctcacccgctgcc ctggcgctctttaagattgacagtgtcacgggccgtattactgtaacaggactgttggac agagagcagggagattcatacactctcactgttgtggccgatgatggaggacccaagaga gactccactgtgaaggtgtcaatcaccattcttgacgagaatgacaacagcccagagttt gacatcacttcggatttgtcggtggatattccagaggacacaccaattggcaagagagtt gcggtcgtgttggcacgagacaaagacgctggaaaaaacggactggtgaatttcaccttg attgcaggaaacatgcaggatgtgtttaagatcaatacagccaataatacctatggagag gtttacttgaacgcccatctggaccgcgaagccgtggaccgttacctgcttaaagtgcgg gcgatggataacggttctcctccgaggttcacagacatgtcccttacagtgaatattttg gatgtgaacgataaccctcctgtgctgcagagccctcgtgggtacaacgtcagcgtcagt gagaacgtgggtggcggtacgtcggttctgcgtgtcgtagcgacagatagagatatcggt cccaatgccatgctatcttactacatcaccggtgggaaccaggacctgaccttcagaatg gaccgtatgacaggagagatagtgacccgaccgtcacctcctgacagagaaaaacaacag cagtacacactcactgtgactgtggaagatgacggaatgccacctttatcaacgtccacc acagtttgggtccgtataattgatgaaaatgacaacgcgcctgagtttccggaggaggag tatgtgacggagctcagagaggggccaaacactgtaggagccattatcgcaaaggttacc gcaatcgaccctgatgaggaactcaacggaaccatccgttatgccatctccaagggcaac ctggcccagacgttccagatcaatagcataacgggtcaaattgtggtcattaaggagctg gattatgagatcagtaatggtcattatgtgctgacggtcacagccacagatcagtgtcct atacctcagttcagactgacctccagcaccacagtcctggtgaatgtggtagatgtgaac gataatgcacccatctttccaagagcattcgagggtccgtttgaaatcacagagggccag ccgggtccacgtgtgtggaccgttaaagctacggacgctgactcgggatccaacggaaaa gtggagtacagcatcaccgcaggggacctgaaaaatgagtttgtgatttcatcagttgaa ggagagttaagagtgaggagagatgtagagctggacagagaaactattgcctattacaac atcaccattactgccaaagatttgggaacaccagccctcagcgctatggtggtagtgggc attcaggtgttggacattaatgataatgaccccgtcctgctcaacttgccctataacacc agcgtgagtgagggagcagcggtctacacctccatcacacaagtgcgggcacaagactct gacagcggccgcaacgctctcctcacatacagcatcactgctggcaacactgatggatcg ttctacattaatgagacatcaggtgtggttcaggtgaacaggccgcttgacagagagaga gtggctgaatatagcctcaccatcactgtcaaagacaacccagacaaccctcgcattgca cgcagggactcagagctgttggtggtgacagtgctggatgtgaatgacaacaggcccatc ttcacacagtctaattacaggggcgagatcagtgaaaactcacccacaggcaccactgtg ttgattctaaatggcccagttctagcagaggacaaagacattggggagaatgcagtggtg aggtatcgtcttctgggaaccagagtggacctgttctccatagactcccgcacaggggtg gtatcagtgcgtgggggtgctgtgctggaccgggaggctttctctgtgccacgggtggag ctgtttctgcttggggaggatgtgggaggtttgaacagcaccgtcccactcactatcact atcctcgacataaacgacaacccacctgtcttcaatccatccagtttcaccgtacacctg ccagaaaacagccccacaggtgtggtagtaacacagctgtctgcgagtgacgctgatgcc ggctctaacggttggctgcagtatcggttagacagcggcgctcaagaccgtttcattgtt gatgctctctctggtgccgtcgtggtcggcaatgctacactggaccgagaggagcggagc tcgtaccgtctagttgtcatcgcaactgaccgaggcacaccacctctttcggggacagcg acgttgactgtcgttctagacgacgtcaacgactcccgtcctcgtttcatacggcctgtg cagaccatcagcgttaacgagtcaactccgccaggagaggtcgtagctacgctcaccgca gaggaccctgatctaagaccgcgcctggagtattacatcatctctgtggaagcaaaggat gatgggaataatccagtggatgggctgcagcagtcgtttggaattgacttttacacaggt gctgtgtttgtacgaaaccccttgaaccgagagctggttgccacttttgagatcattgtt tcagtgcatgacaatgccagtgatgttattgacatgtccgtcagtgtacccaatgccaaa ttaaccatcaacgtgctggatgtgaatgacaacgctccccgttttcgccctttcggagta gcgaacttttcagagagcattctggagggtgccgtgcctggtaccacactgctgtcggtg acggctgtggatcctgataaaggacccaacggacagatcatctaccagctcctacaccta ccccgtggagactacataagacttgaagacccttctacaggtaaaattgtggccaatcgt acggtggattttgaacaagtgcagtggttgaacttcacggtgcgtgcacaggatcacggc acgcctcctcgctttgctgagcttcctgtctatctgcgcattgttgatgtcaacgacaac aacccagtctttcaacggcctttgtatcagaagtccatttttgaggatgttgcacttggc accattattgtaagcgtgagtgcgacagatgcagactccggcctgttctctgtcattgaa tacgggctagtggatggagagggcaagttcggcatcacacccacaacgggtgacatctat atcctgtctgccctggacagagagaccaaggaccgttacacactcacagcctacgctagg gacaaccctggcggaagcccaaacaaccgcagagaaaactccgtccaggtgcagttgaca gtactggatgtaaatgatttccgtccacgtttctcagagagagtcttcaccactagtgtg tttgagaatgagctggttggtacatcagtgatcacaatgaaggccattgacctcgatgaa ggggagaatgcattacttacatacagtctacaaggccctggagcggatgctttctctctg gatcctgacactgggctgattcgctctctgcggttactgcagagttttgagaggtttaat ctgactgtagtggcgaccgatcatggcagaacgcctctctggggaaccgctattcttcag atcaccgtcatagatgtcaatgataacaggccgatctttgtgcggcctgccaatggcact atcatgcacatacttgaggaacagcctcctgggctggtggtgtatgaagtgttcgccaca gacgaggatgagggagtgaacggagaggtccggtatagcttcctgcagactggagcagga aatagagactgggagaacttccatattgatgcagtgactggggtgatcaccactgcagtt aaactagacagagagaaacaagccctgtacagtctggttgtggtggcctatgacctcggg cagcctgtcccatatgagaccatgcagccgctgcaagtggctctatctgacattgacgac aatgaacctgtctttctgaaacctccgagaggaagtttgccatatcagtctctgtctgtg cctgagcactcgtctccagggaccgttgttggcaatgtgactggtgcagtggacgcagac gagggctctaatgctatcgtctactatttcattgcaggaggcgataccgagggaaacttt ggtatgagtgtggccggagttttacgggtcaaaaaagatctggatcgggaagaaatccca gtgtattccatcatcgttaaagcttccagtaaccgaaactggtctcctccgagaggtcaa aggtcacagcgggcccaagtgcttgacccgagccgtgaccctacactacaggaagtaaga atcttccttgaggacatcaacgaccagtctccaagattcacaaagatggaatacacagca ggtgtggctgcagatgctaaagtgggctctgatctgatccgggtgcaagcaattgataat gacattggcaacaacagtcttgttctttatcacattctgtccatccgctacatcaaactg cattccaatgactctgaagacatgggcaacgttttcatcatcggtgagactgatggaatc atccggacgtttgacctgtttatggcgtatgatccggggtattttgtggtggaggttctg gcaagagatctagcaggacatagtgacgtaacactagtgggcatttacattctgagggac gaccaacgagtgaaaatcgtcattaatgagataccagagcgtgtacggctgtttcaggag gagtttataaacctgctctcaaacatcacaggagccatagtcaacactgatgacgtacag tttcatgtggataaaaagggaagagtaaactttgctcaaaccgatgttctgattcatgtg gtcaacaagcagaccaaccgtattctagatgtggagagagtgattcagatgatcgatgag aacaaggagcagttgaggaatctgtttagaaactacaacattctggatgttcagcctgct gtgaccgctcgtgcacctgatgaccttaccaccttacagatggccattatcatcttggca gttttactcttccttgctgccatgttgtttattctgatgaactggtattaccgcacagtg cacaaaaggaagctgaaggcgattgttgctggctccacaggaaatcaggggttgatggat attctggatatgcccaacacaaacaagtactcatttgaaggagcaaatccggtttggcta gatcctttctgcaggaatctggagttagcagcacaggcagagcatgaagacgaccttcct gaagacttgagtgacattgctgacctctggaacagcccggctcgcacacacggtacattt gggcgtgagcctcaggcctctaaaccagaggatgaccgatatttacgagctgctattcag gagtacgacaacatcgccaaactaggacaaatcatgagagaggggcccataaagggctcg ctgctcaaggtggttctggatgactacctgagactcaaaaagctgtttgccgcccgcatg gtcaccaagtcgaccagccacggtgaccagtcatcagttacagagctgatccaaagtgac ctggatgaagatgacgatgagcgcgttggtgtcggaggtcgaggaacccttcgcttcaag cacaaacttccgatcgagctcaggggtcctgacggggtgcacgcggttcacggcagcaca ggcacgctgttgacctctgacctcaacagcctgcctgaagatgaccagcgggctctggca cgctctcttgaagctttgcacgcagatggcggactgtatgccgaacgcaacgcccgaaca gaatctgcaaaatccacaccattgcacagaaacaagggcagcgacactctgtcggagagt ccgttagagatcacggaattatga

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