Labeo rohita (rohu): 127177332
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Entry
127177332 CDS
T09007
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127177332 (tyw1)
Enzymes [BR:
lroh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
127177332 (tyw1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127177332 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
HEM4
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
127177332
NCBI-ProteinID:
XP_050985525
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All DBs
Position
15:18875461..18957245
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AA seq
746 aa
AA seq
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MFLAVLLSCLLYSAVGAEMSGALSFTESYLLTVWQNRLYVYTTAAVLIGVWFTVNMLFKK
KKVVDPVSPLLHKSVKKQEVSPETEKVIHVSGVKVFYGSQTGTAKGFAKELAGDITAQGI
QCEVIDMKEYDPEDRLAEECTSKMICVFLVATYTDGQPTESAEWFCKWLEEASTDFRYGK
TYLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDCNVVKSRHGSVQ
ADFQAWKTKFLNRLQALAKGEKKACSGKCKNGSCKNKKKHKEEAEDSHSLAEKNNSEEEL
MESSSDAESSAEEEKSHGSVIDMEDLGNVMNRMKKAKKMEGDEEDSQRVKLSKQNGVRKS
ESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHR
CMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHRNMIRQFRGVPGV
RPERFEEGLTVKHCALSLVGEPIMYPEINSFLRLLHQQNISSFLVTNAQFPEEIRNLVPV
TQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLKELGEKQQRTVYRLTLVKAWNVDELK
AYADLIALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVIYFVQQLANLLPDYEIACE
HEHSNCLLLAHHKFKVDGEWWTWIDYERFQELIQEYEESGGTKNFSAMDYMAKTPTWATF
GARERGFDPSDTRFQRKNKTKDISGC
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagcggtgttgttatcgtgtttgctgtattctgcagtcggcgctgagatgtca
ggtgctttaagtttcactgagagctacctgctgactgtgtggcagaacaggttatatgtg
tacactactgctgctgttctcataggagtctggtttactgtgaacatgcttttcaagaag
aaaaaagtggttgaccctgtaagtccgttgcttcacaaatctgtgaaaaagcaggaagtt
tcacctgaaacagaaaaagtcattcatgtttctggggtcaaagtgttctatggatcacag
acaggaacagcaaagggttttgcaaaagagcttgctggagacatcaccgctcaggggatc
cagtgtgaggttatagatatgaaagagtacgacccggaggacagactggctgaggagtgc
acaagcaagatgatctgtgttttcctggtggccacatacacagacgggcagcccactgag
agtgccgaatggttctgtaaatggcttgaggaagcctccacagactttcgatatgggaaa
acttacctgaagggaatgagatacgccgtctttgggctggggaactctgtttatgttggc
cattacaacactgtcagtaagaacatagataagtggttgtggatgctgagcgctgcacga
atcatgaccagaggagaaggcgactgcaatgtggtgaagagccgacacggcagcgtgcag
gctgatttccaggcctggaaaacgaaattcttgaaccgactgcaggctctagccaagggt
gagaagaaagcctgttctggcaagtgcaagaatggcagctgcaagaataagaagaaacat
aaggaggaggcagaggacagccactcgctcgctgagaagaacaactctgaggaggagctg
atggagtccagcagtgatgcagagtcctccgctgaggaagagaagtctcatggctccgtc
atcgacatggaagaccttgggaatgtgatgaatcgtatgaagaaagctaagaagatggag
ggagatgaagaggactcccagagggtgaagctgtcaaagcagaatggagtgaggaagagc
gagtcagaggaggagcggagagagatgatcactccagccttgagagacgctctgactaaa
caagggtacaaactaataggaagtcactctggggtaaaactgtgtcgttggaccaagtca
atgctgagagggagaggaggctgctataaacacaccttctacgggattgaatcacaccgc
tgtatggagactacgccaagcctggcctgtgccaacaaatgtgttttctgctggagacac
cacaccaacccagtaggcacggagtggcgctggaaaatggacccggctgagaagatcatt
caagaggctgtggagaaccacaggaacatgattcgccagttcagaggtgttccaggagtt
cgtcccgaacgctttgaagagggccttactgtgaagcactgtgctttgtctctggtgggc
gaacccattatgtatcctgagatcaactcctttcttcgacttcttcaccagcagaacata
tccagcttcctggtcaccaacgcccagttccccgaggagatcaggaatcttgtgcctgtt
acacaactttatgtcagcgttgatgccagcacgaaagacagtctgaagaaaattgaccgt
cccctcttcaaagacttctggcagcgctttttggacagtcttaaagaacttggtgaaaag
caacagcgtacggtgtacagactgaccctggtgaaggcctggaatgtggatgagctgaag
gcctacgccgatctcatcgcccttggacagccagatttcatcgaggtcaagggagtgaca
tactgtggcgagagctcagccagtagcctgacaatggccaacgtaccatggcacgaggag
gtcatctatttcgtgcagcagcttgccaacctgctcccagactatgaaatcgcctgcgaa
cacgagcactccaactgtctgttactcgctcaccacaagttcaaagtcgacggggagtgg
tggacgtggattgactacgaacgcttccaggagctcattcaggaatacgaggagagcgga
ggcaccaaaaacttctcagcgatggactatatggccaagacccccacctgggccactttt
ggtgcccgagagagaggatttgacccctcagacacacgcttccagagaaagaacaagacc
aaagatatctcagggtgttga
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