Limosilactobacillus reuteri SD2112: HMPREF0538_20605
Help
Entry
HMPREF0538_20605 CDS
T01551
Symbol
clpC
Name
(GenBank) negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lru03110
]
HMPREF0538_20605 (clpC)
Chaperones and folding catalysts [BR:
lru03110
]
Heat shock proteins
HSP100
HMPREF0538_20605 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
Sigma54_activat
AAA_16
nSTAND3
AAA_18
UVR
ATPase_2
AAA_14
Zeta_toxin
RuvB_N
IstB_IS21
AAA_7
RNA_helicase
TniB
AAA_28
AAA_25
NACHT
RsgA_GTPase
DNA_pol3_delta2
ABC_tran
Torsin
Ubiquitin_5
KTI12
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEI56817
UniProt:
F8DN98
LinkDB
All DBs
Position
complement(587123..589615)
Genome browser
AA seq
830 aa
AA seq
DB search
MDNMFTPSAKHVLAIAQEQAKYFKHQAVGTEHLLLALSMDKDGIANKIFEQFSITNDDIR
EEIERLIGYGTMENLGASDYLPYSPKAKQVLSLAGKEAQQMHALKIGTEHLLLALIADES
VLSSRILYSLDVVPRQMRKVILRRLGIADSQQRNPNRQSSRRRIQQTGTPTLDKLARDMT
ELARNGQLDPVIGRNKEVKRVEQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRMVDGKVP
AELANKRLMMLDMGSLVAGTKYRGEFEDRLKKVIDEIQNDGHVILFIDELHTLIGAGGAE
GAIDASNILKPALARGELQTIGATTLDEYQKYIESDAALERRFATVQVDEPTTDQTLQIL
RGLRPKYEEHHHAKITDEALEEAVKLSDRYISDRFLPDKAIDLIDESAAMVRIDAEDKKN
HQPSLESQLEDLRTQKEEAIDNQDFDRAATLRQQELALKDKIDRKKQRTQQKDSHNYKLK
VTGENIAQVVAEWTGVPLTQLKKSESERLVNLEKVLHQRVIGQDEAVTVVAKAIRRARSG
LKDPSRPIGSFMFLGPTGVGKTELAKALAAAMFGSEDNMIRIDMSEYMEKYSTSRLIGAA
PGYVGYDEGGQLTEKVRQHPYSVVLLDEAEKAHPDVFNLLLQVLDDGYLTDAKGRRVDFR
NTIIIMTSNLGATQLQDEKEVGFGAKDMSQDYNAMAAAIKQQMRLYFRPEFLNRIDETII
FHSLQKKELHQIVKLMVNDLNKRVSEQGINLKVTPAAIDVIAKLGYNPAYGARPLRRALQ
DHVEDDLSTGLLSGEINVGDDVTVGAHHGKITFKVKKPDEDKAVELKLNR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggataatatgttcacgccaagtgcaaagcatgttctagcaattgcacaagaacaagca
aaatactttaaacaccaagcagtagggactgaacaccttctgcttgccctctcaatggat
aaagatgggattgctaacaaaatatttgaacaattttctattacgaacgatgatattcgt
gaagaaattgaacgcttaattggctatggaacgatggaaaatctgggagcttcagattat
ctcccatactcaccaaaagcaaagcaagtattatcgttagcaggtaaagaagcccaacaa
atgcatgcattgaagattggcactgaacacttattattagccttaatcgctgatgaaagt
gttctatcttcacggattttatatagtctagatgttgtgccacgacagatgagaaaagta
attttacggcggttagggattgctgatagtcagcaacgcaatcctaatcgtcaatcatct
cgtcgacggattcagcaaactggtacaccaacattagataaactagctcgtgatatgaca
gaacttgctcggaatggtcagcttgatcctgtaattggtcgaaataaggaagttaaacgt
gtggaacagattcttagtcgtcgtaccaagaataacccagttttgattggagaaccggga
gtagggaagacggcaattgctgaaggacttgctcagcggatggttgatggtaaggttcca
gctgaattggctaataaacgtttgatgatgcttgatatgggatcattagttgcaggtacc
aagtatcgaggagaatttgaagatcgtcttaaaaaagtaattgatgagattcaaaacgac
gggcatgtgattctttttattgatgaactccataccttaattggtgctggtggtgctgaa
ggtgcaattgatgcctccaatattttgaaaccggccttagcgcgaggcgagttgcaaaca
attggtgctactacgcttgatgaatatcagaaatatatagaatcggatgcagcacttgaa
cgacgctttgccactgttcaagttgatgagccgactactgaccaaactctacaaatcctg
cgaggactacgaccaaagtatgaggagcaccatcatgctaaaattactgatgaagcgcta
gaagaagcagttaaattgtcagatcgttatatttcggatcgattcttgccagataaagca
attgatcttattgatgaatcggcagctatggttcgaattgatgctgaagataagaaaaat
catcagccttcactagaaagtcagttagaagatttgcgaacccaaaaagaagaagcaatt
gataatcaagactttgatcgtgcagctactcttcgtcaacaggagttagcactaaaagat
aagattgaccgtaaaaaacaacgcactcaacaaaaagattctcataactacaaattgaaa
gtaactggtgaaaacattgcacaagttgttgctgaatggacaggagttcctttaactcaa
ttgaagaagagtgaaagtgaacgattggttaacttggaaaaggttctgcatcaacgagta
attggtcaagatgaagcagttaccgtagtcgctaaggcaattcggcgtgcacgaagcggt
cttaaggatcctagtcggccgattggttcttttatgtttttaggaccgaccggggtagga
aaaacagagcttgccaaggcattagctgctgcaatgtttggctcggaagataatatgatc
cggattgatatgtccgaatatatggaaaaatatagtactagtcgcttgattggtgccgct
ccaggatatgtcggttatgacgagggtggccaactaactgaaaaagtacggcaacatcca
tattcagttgtcttattagatgaagctgaaaaggcacatccggatgtatttaatttatta
cttcaagttttagatgatggttacttaactgatgcaaaaggtcggcgcgttgattttaga
aataccattattattatgacttctaaccttggagcaactcagcttcaggatgaaaaagaa
gttggttttggggcaaaagatatgtcacaagactataatgcgatggcagcggcgattaag
caacaaatgaggttatacttccgcccagaattccttaatcggattgatgaaacgattatc
ttccattcattacaaaagaaagagcttcatcaaattgttaaactcatggttaatgattta
aataaacgggtaagtgagcaaggcattaacttgaaagttacgcctgctgcaattgatgta
attgcaaagcttggttacaatcctgcttatggagctcgtccgcttcgtcgtgccttacaa
gatcatgttgaagatgatttgagtactggactacttagtggtgaaatcaatgttggagat
gacgtaacagtaggtgcgcatcacggtaaaattacttttaaagtaaaaaagccagatgaa
gataaagctgttgaattaaaattgaatagataa
DBGET
integrated database retrieval system