Limosilactobacillus reuteri SD2112: HMPREF0538_21756
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Entry
HMPREF0538_21756 CDS
T01551
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0538_21756 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_21756 (ruvB)
Enzymes [BR:
lru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0538_21756 (ruvB)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0538_21756 (ruvB)
RecFOR pathway proteins
HMPREF0538_21756 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_14
AAA_3
NB-ARC
RNA_helicase
AAA_22
DUF815
TsaE
AAA_24
Sigma54_activ_2
Rad17
AAA_25
AAA_18
IstB_IS21
AAA_17
NACHT
Bac_DnaA
NTPase_1
AAA_19
Parvo_NS1
AAA_33
ATPase_2
AAA_28
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEI57965
UniProt:
F8DN28
LinkDB
All DBs
Position
1785766..1786782
Genome browser
AA seq
338 aa
AA seq
DB search
MENDHGILSDHPSGEEENQVEITLRPQKLREYIGQPKIKHELEVYIKAAQSREEALDHVL
LYGPPGLGKTTLAMVIANEMGVNIKTTSGPAIEKPGDLVALLNELKPGDVLFVDEIHRLP
KVVEEMLYSAMEDYYIDIVIGEGPTAHPVHFPLPPFTLIGATTRAGMLSAPLRDRFGIVE
HMNYYTQDELTKIIFRSAKIFHTSIQNEGAHELSLRSRGTPRIANRLLKRVRDFAQVAGK
QSIDSAIVKQALSLLQVDDRGLDEIDRKMLLTMINFYHGGPVGLKTIAANIGEETNTIEE
MYEPYLLQIGFISRTPRGRLVTPTAYEHLGIEYPTDRN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatgatcatggtattttatcagatcacccatcaggagaagaagaaaaccaagtg
gagataactcttcgaccacagaaactaagagaatatattggtcaacctaaaatcaagcac
gaactagaagtatatattaaggcggcccaatcccgagaagaagcccttgaccatgtattg
ttatatggtcctccaggattaggaaagacaactttagcgatggtaatagctaatgagatg
ggcgttaatatcaaaacgactagtggaccagcgatcgaaaagccaggagatttggttgct
ttattgaatgagttgaaaccgggggatgtcctttttgttgatgaaattcaccggttaccc
aaagttgtggaagaaatgctttattcagcgatggaagattactatattgatattgttatt
ggtgagggaccgactgcgcaccccgttcattttccccttcctccatttacattaattggg
gcaacgacacgagccggaatgttatcggcaccattacgtgatcgtttcggaattgttgaa
cacatgaactactatactcaagatgaactgacaaaaattatttttcgttctgccaagatt
ttccatactagtattcaaaatgaaggggcccatgaactatctcttcgttcacgtggtacg
ccgcgaatcgcaaaccgccttttaaaacgggtacgtgattttgcccaggtagcagggaaa
caaagcattgattcagcaattgttaagcaagcattatcgctgctccaagttgatgatcgg
ggcttagatgagattgatcggaaaatgttgttaacgatgatcaatttctaccatggaggt
ccagtgggattaaaaacaattgcagcaaatattggtgaagaaactaatacgattgaagaa
atgtatgaaccatatttgttacagatcggctttattagtcgtactcctcgcggccggtta
gtgacaccgacagcatatgaacatttaggaattgaatatccaactgatagaaattga
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