KEGG   Litorilituus sediminis: EMK97_03730
Entry
EMK97_03730       CDS       T05852                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
lsd  Litorilituus sediminis
Pathway
lsd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lsd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EMK97_03730 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lsd02044]
    EMK97_03730 (tssI)
Secretion system [BR:lsd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EMK97_03730 (tssI)
SSDB
Motif
Pfam: Phage_GPD DUF2345 Phage_base_V DUF3540 Sarcoglycan_1 EIN3_DNA-bd DUF6484
Other DBs
NCBI-ProteinID: QBG34907
UniProt: A0A4P6P643
LinkDB
Position
complement(815198..817225)
AA seq 675 aa
MNAPEFLKSVEANKSQYHLNISGLPSELLSVTDIQSIRDELCSNYQFTIEVLSRSLLSSQ
AIIGKDISLTIVWGLADRTISGIVSHLVARGESYQGFHYTVTLSSHLSLLHHKRSNRVFS
GLTIDAIVTSVFKKAGFPMANFSMKAASSSQDMIVQYNETDLEFVDRIMRKCGWVYGVIE
KNGNPIVTVAKSSSSFAGYSGSIDIMYQAPTSTVRANECIFAVSRKSSFLTQSVHLNDYY
YQTMGDMNSYDSNKTDVNGFGSDYRYGENYKHYVDGNTMAKIRQRSIDCQRDIFIIDTDC
RAIRPGMIVNIIDHQDYSGSYFVTKVDHIGSQSGGVNYGDKVKNLHYKNQAHLVPTTVPY
IAPIPDNKRVFTSFNATIEQEVDEKGRYIVKLPFNQDGEGPESQPTRMVQPYGGSGHGMN
FPLTKGTEVIVCGENGDLDRPIILGAVYNKASPNPVTSENSHENKVVTRAGHSLLMDDKL
GEEKISIANPGDTNVLTLDATNGNHQASLSANQGQLSIQAKDNLIAQTESNYLVTANKDV
NLSANENVHIETREGDISLTSGREIKTKAGGGVSFEATENNIDITANSNINMQASQDMSL
YSEQGNIEIKSEQADVAIASGGNIVLKSTSNGSIHLSQGGGSIEIDAGGNLNIDANTITL
SATNIVIKGNAVSNN
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgaatgccccagaatttttaaaaagtgttgaagcgaataaaagccaatatcatctcaat
atttcaggcttacctagtgagctattgtctgtaaccgacattcaatcaattcgtgatgaa
ttgtgcagtaattatcaattcacgatagaggtgttaagtcgcagtttattgtcgtcacag
gctattattggtaaagacatttcgttaactattgtttggggcttagctgatcgcaccatc
tcaggtattgttagccatctagtagcgcgtggtgaaagttatcagggctttcattacacc
gtcaccttgagttcgcacttatctttattacaccataaacgctccaatcgagtttttagt
ggcttaacgattgatgctatcgtgaccagtgtctttaaaaaagcgggctttcctatggct
aactttagcatgaaagcggcgtcttcatcgcaggatatgatcgttcaatacaatgaaacc
gatttagaatttgttgatcgtattatgcgaaaatgcggctgggtgtacggtgttattgaa
aaaaatggcaatcctattgtcactgtggctaagtcaagcagtagctttgctggctactcg
ggttctattgatattatgtatcaagcaccgacgagtaccgttagggcaaatgagtgtatt
tttgcggtcagtagaaagtcgtcatttttaacacaaagcgttcacttaaatgactattac
tatcaaaccatgggcgatatgaattcatatgatagcaataaaaccgatgttaatggtttt
ggctctgattatcgctatggtgaaaattataagcactatgttgacggtaacacaatggcg
aaaatcaggcagaggtcaatagattgtcagcgtgatatctttattattgatactgattgt
cgtgcaatacgccccggtatgatagtgaatatcattgatcatcaagattatagtggtagt
tattttgttactaaggttgatcatattggcagtcagtctggcggtgttaactatggtgat
aaagtaaaaaatctacactataagaatcaagctcacctcgtgccgacaacagtgccatat
atcgctcctataccagataataaaagagtgtttacttcttttaatgccacaattgaacaa
gaagtcgatgaaaaaggtcgatatatagtaaaactaccttttaaccaagatggtgaaggg
ccagagagtcagccgacacgtatggtgcaaccctatggtggtagtggtcatggtatgaac
tttcctttaaccaaagggacagaagtcattgtttgtggtgagaatggtgatttagataga
cccattatccttggcgcggtatacaataaagcctcacctaatccggtaacctcagaaaat
agtcatgaaaataaagtcgtgacccgtgccggacatagcttgttaatggacgataaatta
ggtgaagaaaaaatatcaatagccaatccaggtgatactaatgtactgacactggatgcg
actaatggcaatcatcaagcgtcattgagtgctaatcaaggccagttatctattcaagca
aaagataacctgattgcacagacagaaagtaattatttagttaccgctaataaagacgtc
aacttatcggccaatgaaaatgttcacattgaaaccagagaaggtgacatttccttaacg
tctggccgagagattaaaaccaaagcaggtggtggtgttagttttgaagcaacagaaaat
aatattgatataacggcaaacagtaatatcaatatgcaagccagccaagacatgtcgctg
tattcagagcaaggtaatattgaaataaagtctgaacaagccgatgtggcaattgcttcg
ggaggcaatattgtgcttaaaagtaccagtaatggtagtatccacctctctcagggagga
ggttcaattgaaatcgatgctggcggtaacctcaatattgatgcgaatacaattaccttg
agtgcaactaatattgttatcaaaggtaatgcggtctcgaataattag

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