Listeria seeligeri: lse_1447
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Entry
lse_1447 CDS
T01184
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lsg
Listeria seeligeri
Pathway
lsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
lse_1447 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_1447 (ruvB)
Enzymes [BR:
lsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lse_1447 (ruvB)
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lse_1447 (ruvB)
RecFOR pathway proteins
lse_1447 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
NB-ARC
RNA_helicase
nSTAND3
AAA_25
Rad17
DUF815
AAA_14
AAA_22
Sigma54_activ_2
AAA_3
NACHT
IstB_IS21
bpMoxR
AAA_24
TsaE
AAA_18
NTPase_1
Resolvase
AAA_33
AAA_19
Parvo_NS1
ABC_tran
ATPase_2
AAA_17
Motif
Other DBs
NCBI-ProteinID:
CBH27598
LinkDB
All DBs
Position
complement(1479981..1480988)
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AA seq
335 aa
AA seq
DB search
MDERIISSETVDSEEVSFETSLRPQTLSQYIGQDKVKNNLTVFIEAATLRNEALDHVLLY
GPPGLGKTTLAMVIASEMGSQIKTTSGPAIERPGDLATILTSLDPGDVLFIDEIHRLSRA
IEEVLYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVIDHL
EFYTEEQLTEIVLRTANILDTKIDDLGAREIARRSRGTPRIANRLLKRVRDFAQVRGNGT
VTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFRGGPVGLDTIAASIGEERETIEDMQ
EPYLLQIGFLQRSPRGRIATEIAYKHLGISYEKEV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgaattatttcaagtgaaacggtagactcagaagaagtatcttttgaaact
agtttacggccacagaccctttcacaatatatcggacaagacaaagtgaaaaataattta
accgtctttattgaagctgcaacccttcgtaatgaagccttagaccatgtgcttttgtat
ggaccacctgggcttgggaaaacgacgctcgcgatggttatcgcatctgaaatgggtagt
caaattaaaacaacaagtggaccagccatcgaacggccaggtgatttggcgaccatttta
actagtttggatccaggggatgtcttatttattgatgagattcatcgcttatctcgagct
attgaagaagttttgtatccagcgatggaagattattgtttggatattgtgattggaaca
ggaccaacagctcggtcggttcgtcttgatttaccaccgtttaccctaattggggcaaca
acgcgtgcagggcttttatcggcgccacttcgagatcgttttggtgttattgatcacttg
gaattttatacagaggagcaattaacagagatagtcctcagaactgcgaacattttagat
acaaaaatagatgatttgggtgctcgcgaaattgctaggcgttccagggggaccccgcgg
attgccaatcggttgttaaaacgtgtccgtgattttgctcaagtgaggggcaatggtacg
gtcacagaaaaactcgctaaagaagcacttactttacttcaagtagatccaagaggtttg
gatacaattgaccaaaaactgctccatacaattatccagtcatttagaggcggtccggtc
ggtttagatacaattgctgcgagtattggggaggagcgcgaaaccattgaagatatgcaa
gaaccatatctactccaaattggttttctgcaaagaagcccaagaggccgcattgctaca
gaaattgcctataaacatttaggaataagttatgaaaaagaggtataa
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