Ligilactobacillus salivarius CECT 5713: HN6_00210
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Entry
HN6_00210 CDS
T01962
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsi
Ligilactobacillus salivarius CECT 5713
Pathway
lsi03420
Nucleotide excision repair
lsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HN6_00210 (rep)
03430 Mismatch repair
HN6_00210 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsi03400
]
HN6_00210 (rep)
Enzymes [BR:
lsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HN6_00210 (rep)
DNA repair and recombination proteins [BR:
lsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HN6_00210 (rep)
MMR (mismatch excision repair)
Other MMR factors
HN6_00210 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
UvrD_C_2
PhoH
AAA_30
NACHT
DEAD
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ADJ78540
LinkDB
All DBs
Position
complement(268747..270969)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEIQKQLDATQIEYDKAHKETTSVERNYVQNARVNTYEVDDQMETNAEIQQQKNLVAKT
IENETILKKQLSTLKILQDSAYFGRIDIHENGEEDSETLYIGTSSLVDEDQDFLIYDWRA
PISSIYYNGTLGPVSYETPMGEQFAELKKKRQFTIKKGVITNMFDTNETIGDEILQSVLG
EHSDEYMRNIVATIQAEQNDIIRDVKHDLLLVQGVAGSGKTSAILQRIAFLLYHSRDKLN
AEQIVLFSPNLLFSHYISEVLPSLGEKNMRQITLAEFLNNRFEGLQVESLFDKYEKKITS
SKKTNSIESIKEDPQFMHTVEEYVQNVSSSQLRFTDIMLDSEIFFSHNEIHDIYSQLPQA
MKPSQKFAETKNLLIKQLNRKIKENAQADWVRSEIENLSDEEYYDLLGTKRRHAFQAIDD
EEFYIGRKIVKKRFAPVYDALYNNYFIDYYAQYSDFLANKLPEAVDLFNQNLEFHKIDLV
DAAPLLYLRDLLTGSGRNQAIAHLFIDEMQDYTLPQLMYLKYIFPNAKLTLLGDSEQALF
NEFRTPQELLDYFNKHLNVKKSRIIKLNKSYRSTQQITNFMKALLPDGNEIQAFTRQGKK
PELIIASKENGLHALKLELKQRDLSSPVALITKNQAESDFLYQKLRKSFDSVTLLEDKDR
SLPKGIVILPIYLAKGLEFDDVIAYDISHDNYSGINDTGILYTICSRAMHRLTLISCGKP
SSLIMSIPSDLYTTKSTVTL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattcaaaagcaattagatgctactcaaattgaatatgataaagctcacaag
gaaactacttcggttgaaagaaattatgttcaaaacgctagagtcaatacatatgaagtt
gatgatcagatggaaacaaacgccgaaattcaacagcaaaagaacttggttgcaaaaacg
attgaaaacgaaacaattttaaagaaacaattatccactctaaaaattctacaagattct
gcttacttcggtagaattgatattcatgagaacggagaagaagattccgaaactctttat
atcggaacatcttcattagtagatgaagatcaagattttctcatctatgattggcgtgcc
cctatttcttctatttactacaatggtacacttggccctgtatcctatgaaacacctatg
ggagaacaatttgctgaattaaaaaagaaacgtcaatttactataaaaaaaggtgtcatt
actaatatgtttgatactaatgaaacaattggtgatgaaattttacagagtgttttggga
gaacattctgacgaatacatgcgtaatatcgttgctactattcaggctgaacaaaatgat
attatccgcgatgttaaacatgacttgcttctagttcaaggagttgcgggttctggaaaa
acttctgctatcttgcaaagaattgcttttcttttatatcatagtcgtgacaaacttaac
gctgaacaaattgtgcttttctcacctaatcttttattcagtcactatatttctgaagtg
ttgcctagtttaggtgagaaaaacatgcgccaaattactttggcagaatttcttaataat
cgttttgagggattacaagttgaaagtctctttgataaatatgaaaagaagatcacttct
tctaaaaaaacaaattcaattgaaagtattaaggaagatccacaatttatgcatacagtt
gaagaatatgtccaaaatgttagctcatcccaactaagatttactgacattatgctagat
tccgagattttctttagtcataatgaaattcatgatatctattcccaacttccacaggct
atgaaacctagtcaaaaatttgctgaaactaaaaacttacttattaaacaattaaacaga
aaaattaaagaaaatgctcaagctgattgggttcgtagtgaaatcgaaaacttatcagat
gaagaatactatgatttacttggtactaaaagacgtcatgcctttcaagcaattgatgat
gaagaattttacattggtagaaaaatcgtaaaaaaacgctttgcccccgtatatgacgct
ttatataacaattattttattgactactatgctcaatattctgattttttagccaataaa
ttaccagaagctgttgacctttttaatcaaaatttggagtttcataaaatagatttagtc
gatgctgctcctctgttatatttacgtgatttactaacaggtagtggacgtaatcaagct
attgcacatctatttattgatgagatgcaagattacacattaccacaattaatgtattta
aagtatattttccctaatgctaaactcactcttttaggtgatagtgaacaagcattgttc
aacgaatttagaacaccacaagaattactagattactttaacaaacatctcaatgtcaaa
aaatcacgcatcatcaagttaaataaaagttatcgttcaacacaacaaataactaatttt
atgaaagctttattaccagatggcaatgaaattcaagcttttacacgccaaggtaaaaag
cctgaattaattatcgcttctaaagaaaatggattacatgcattgaaacttgaattaaag
caacgtgatttaagttctccagttgctttaataactaaaaaccaagctgaaagtgacttc
ttatatcaaaaacttcgtaaaagtttcgattctgtcactttactagaagataaagatcgt
tcattgcctaagggtatcgttattttaccaatttatcttgctaaaggattggaatttgat
gatgttatagcttatgatatttcacatgataattattctggaataaatgatactggaatt
ttatacacaatttgttctcgtgcgatgcacagactaactttaatttcatgtggaaagcca
tcatctttaattatgagtattccatctgatttatacactactaagtcaaccgttacttta
taa
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