Candidatus Liberibacter solanacearum: CKC_05560
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Entry
CKC_05560 CDS
T01373
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lso03016
]
CKC_05560
Enzymes [BR:
lso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CKC_05560
Transfer RNA biogenesis [BR:
lso03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKC_05560
Prokaryotic type
CKC_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADR52857
UniProt:
E4UE29
LinkDB
All DBs
Position
complement(1186919..1187662)
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AA seq
247 aa
AA seq
DB search
MIRYCLIIEYDGSGYVGWQRQKNGVSIQGEIEKAIFLVTGESMTVYGAGRTDSGVHALRQ
VAHFDLVREWVPEKLCKALNAHLNISNDISILELCVVDEKFHARFSAIRRSYLYRIITRQ
APLALEKGRAWWFPKDLDCEMMRVAAQHLIGKHDFTTFRSVQCQALSPIRTIDRLDINRL
GDMIEIRVVARSFLHTQIRSFVGSLKLVGDRKWTSDDLQKALKAQDRKACGPLSPSEGLY
FDSVEYS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatacgttattgtttgataattgaatatgatggaagtggctatgttggttggcaaaga
cagaaaaatggggtttctattcaaggtgaaatagaaaaagctatttttttggtgacaggt
gaaagtatgacggtatatggtgcaggtcgtaccgattctggtgttcatgctcttaggcaa
gttgctcattttgatttagtgcgagaatgggttccggaaaaattatgtaaagcgttaaat
gcgcatttaaatatctctaatgatatttctatacttgaattgtgtgtggtagacgaaaaa
ttccatgctcgtttttcggctattcgtcggagttatctttatcgtattattacgagacag
gcacctctagctcttgaaaaagggcgtgcatggtggtttccaaaagatttagattgtgaa
atgatgagagtggcagcgcaacatttgattggtaaacatgattttactacttttcgatcg
gttcagtgtcaagcattatcgcctatacgtacaattgatcgtcttgatatcaatcgattg
ggagatatgattgagattcgagtcgttgcacggagttttttacatacccaaatacgttct
tttgttggaagtttgaaattagtaggtgatcgaaaatggacatcagacgacttacaaaaa
gcgttaaaagctcaagatcgtaaggcatgtggtcctttatctccctctgaggggctttat
tttgattccgtagaatattcttaa
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