Lonchura striata domestica (Bengalese finch): 110468627
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Entry
110468627 CDS
T05897
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03020
RNA polymerase
lsr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110468627 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110468627 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110468627 (POLR3A)
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110468627 (POLR3A)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110468627 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2120
Motif
Other DBs
NCBI-GeneID:
110468627
NCBI-ProteinID:
XP_021382365
LinkDB
All DBs
Position
6:12556690..12588490
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKSLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKTTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSTFLQSFETAIEYNKEVEPLLGRAQENLNPLVVLNLFKRIPVEDIPLLLM
NPQAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CQDSFLQTLTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICVSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHVDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHRADK
ESTPPRRPLIFDHNEFHIPIVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagaccgatgtggccaagaaaataagccacatctgtttt
ggcatgaaatctccagaagagatgcgtcagcaagctcatattcaagtggtcagcaaaaat
ttgtatagtcaggacaaccatcactctccgctgcaatatggagtgctggaccatcgcatg
ggaaccagtgaaaaagaccgtccctgtgaaacctgtgggaaaagtctggctgattgtttg
gggcattatgggtacattgacttagaactgccatgttttcacgttgggtacttcaaagct
gtgataggcatcttacagatgatctgcaaaacctgttgccgcatcatgctgtcagtggaa
gaaaaaaagcagtttttggattacctaaaacgacctggccttacatatcttcagaagaga
gggctaaaaaagaaagtgtcggagaagtgccgaaagaaaaccacttgtccttactgtggg
gcctttaatggaactgtgaagaagtgtggtttgttgaagataatacatgaaaagtacaag
acaaataagaaagttgtagatccaatagtatctacttttctccagtcctttgaaactgcc
attgaatataacaaagaagtggagcccttactgggaagagctcaggaaaacttgaatcct
ttggtagtattgaacctctttaaaagaatcccagtggaagacatccctctacttctaatg
aacccacaagcaggaaaaccttcagatttgatcctcacaagactcctggtgcctccacta
tgtatcagaccctctgttgtgagcgatttgaagtctggcaccaatgaggacgatttgaca
atgaaactgacagaaatcattttcctcaatgatgtgataaaaaagcataggatatcagga
gccaaaacacagatgattatggaagactgggattttcttcaactgcagtgtgccctgtac
attaatagtgagctctctggcatacccctcaacatggcacctaaaaaatggaccagagga
tttgttcagagacttaagggaaagcaaggtcggtttagaggcaatctgtctggaaagaga
gtggatttttctggcagaacagtcatttcacctgatcctaacttaagaatagatgaagta
gcagtgccgattcatgttgctaaaatattgacctttcctgaaaaggtgaacaaagcaaat
attaattttatgaggaaacttgtctgtaatgggcctgatgttcatcctggagcaaacttc
atacagcaaaggcacactcaaatgaaaagatttttgaaatacggcaaccgagagaagatg
gcacaggagctgaagtttggtgacattgtggagcgacatctgatagacggtgacatcgtc
ctgttcaaccggcagccctctctgcacaagctgagcatcatggctcacattgctagagta
aaacctcataggacgttcaggttcaatgaatgtgtctgtacaccatacaatgcagatttt
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacaccaagaaatggagagcctcttattgct
gctattcaagatttcctcacaggtgcttatcttcttacattgaaagataccttttttgat
cgagccaaagcctgtcaaattattgcttctatcctggttggcaaggatgaaaagatcaaa
gttcgtcttccacccccagcaattctgaagcctgtaacactctggacaggaaagcaggtt
ttcagcctcattctcaaacccagtgatgattgtcctgtaaaagccaacctacgaacaaag
ggcaaacagtattgtggcaaaggggaggacctgtgttacaatgattcttatgtcacaatt
caaaatagtgagttaatgagtgggagtatggacaaaggaacactggggtcaggatccaag
aacaacatcttctacatcttgctgagagactggggccaggtggaagctgcagatgccatg
tcacgtctggccagacttgctccagtctatctttctaatcgtggcttttcaattggaatt
ggtgacgtaacccctgggcagggcctgctaaaagctaagtatgagctcctgaatgccggc
tataagaaatgtgatgagtatattgaagctctgaacactggcaagctccagcagcagcct
ggttgtactgcagaagagacactagaggccttaattcttaaagaactgtctgttatcaga
gatcatgctggcagtgcctgtctcagagaactggacaagagcaacagtcccctgatcatg
gctctctgtggttctaaaggctccttcattaacatatcccagatgattgcttgtgtaggg
cagcaggctatcagtggctcccgtgttcctgacgggtttgagaacaggtccttgcctcac
tttgagaagcattctaagctccccgcagcaaaaggctttgttgccaacagcttctattct
ggcttgactcccactgaattttttttccacacaatggctggtcgagaaggtctggtggat
acagctgtaaaaacagctgaaactgggtatatgcagagacgtctggtaaaatccctggaa
gatctttgctcacagtatgatttaacagtgagaagttctactggtgacattatacagttt
atttatggaggagatggcttagatcctgcagctatggaaggaaaggatgaaccactggaa
ttcaagagagttctagacaatatcagggctgtctatccatgccgaagtgaaccagccctt
agcaaaaatgaattggtgttaacatccgagtccataatgaagaagaatgaatttctttgc
tgccaagacagttttctgcagacattaactgagacaggttatgaaaaatataatgaggaa
attaaaaaatttatcaaaggtgtttctgagaagataaaaaaaacgagggacaagtatgga
attaatgacaatggcacaacagagccaagagttttgtatcagttggataggattactcca
acacaactagagaagtttctagagacttgtagagacaaatacatgagggcacagatggag
cctggttctgcagtaggagctctttgtgcacagagcattggtgagcctggcacacagatg
actctgaagactttccattttgctggtgttgcttcaatgaacattactttgggtgtgcca
agaatcaaagaaattattaatgcttcaaaggctattagcacccctattataacagctcag
ttggacaaagatgatgatcctgattttgcccgtctggttaagggaagaattgagaaaact
ttgttaggagagatttctgaatatattgaggaagtgtttcttccagatgattgtttcatc
ctagtgaagctgtctttagagcgcattagactactgagattagaggtgaatgccgagact
gtgcgctactcgatttgcgtctctaaactcagagtgaagcctggggatgtggctgtccat
ggagaagcagttgtgtgtgtgacccctcgtgaaaatagcaagagttccatgtattatgtg
ttgcagtccctcaaggaagaactaccaaaggttgtagtgcaaggcataccagaggtttcc
cgagctgtcattcatgttgatgaacaaagtggaaaggaaaaatacaaacttctggttgaa
ggtgataatctacgagctgttatggctactcatggagtgaaaggaacaaaaacatcctct
aacaacacttatgaggtagagaaaactctgggaattgaagctgctcggacgaccattatc
aatgagattcaatacacgatggtgaaccatggcatgagcattgacaggagacatgttatg
ttattgtctgatctaatgacttacaagggtgaagttctgggcattaccaggtttggactg
gcaaaaatgaaggaaagtgtgttgatgctggcttcttttgaaaagactgcagaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtttctgagtgcatcatc
atgggaattccaatgaatattggaacaggtctctttaaactgttacacagagcggacaaa
gaatcaacccctcccagacggcctctgatatttgatcataatgaatttcatattcccatt
gttacatag
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