Lonchura striata domestica (Bengalese finch): 110470080
Help
Entry
110470080 CDS
T05897
Symbol
UBR5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110470080 (UBR5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110470080 (UBR5)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110470080 (UBR5)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
HECT type E3
110470080 (UBR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
PABP
zf-UBR
Motif
Other DBs
NCBI-GeneID:
110470080
NCBI-ProteinID:
XP_021385116
LinkDB
All DBs
Position
2:complement(131388952..131476597)
Genome browser
AA seq
2813 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFSVQPDRLELGKPENSDGSKLSSGSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWNSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSIIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPNLDKKNTPVQSPVSLGEDL
QWWPDKDGTKFISIGALYSELVAVSSKGELYQWKWSESEPYRNAQNPSLHHPRAMFLGLT
NEKIVLLSANSIRATVATENNKVATWVDETLSSVASKLEHTAQTYSELQGERIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKNMEKASKTTEAKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVE
DVKNVPVGKVLKVDGAYVAVKFPGTSNNANCQSSSNSDPDPSSLLQDCRLLRIDELQVVK
TGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQ
ENNFPTSSIAFLGQNERSVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPP
ISSLGMGVHSLTNLPANSTIKKKAAIIIMAVEKQTLMQHILRCDYEACRQYLMNLEQAVV
LDQNPQMLQTFLGHRCDGNRNILHACVSVCFPTSNKETKEEEGLPHSVHKMDGAHRMEAE
RSERNTFAERLSAVEAIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHE
AGASSSDHQDPVSPPIAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTAATGTGQGPSTST
IPGPSTEPSVVESKDRKANAHFILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRA
YPAAITILETAQKIAKAEATSSEKEDDVFMGMVCPSGTNPDDSPLYVLCCNDTCSFTWTG
AEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIA
GQKSARLDLLYRLLTTTNLVTMPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRK
TANPEDSDMPDHDLEPPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLP
EEQVYLNQQSGTIRLDCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAIAVT
MRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIIP
VRMGIARPTAPFTLASTSIDAMQGSEELFSVEPLPPRPSSDQSSSSSQSQSSYIIRNPQQ
RRISQSQPVRGRDEEQDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEH
DEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDD
SQSNDSSDSDSSSSQSDDIEQETFMLDEPLERTTNSSHANGAAQAPRSMQWAVRNTQNQR
TTSTAPSSTSTPAASSAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLA
RAYSIVIRQISDLMGLIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSI
MDSTEAQLRYGSALSSAGDPGHPNHPLHASQNSARRERMTAREEASLRTLEGRRRATLLS
ARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQT
TLDTPQLERKRTRELLELGLDNEDSEHENDDDTNQSATLNDKDDDALPAETGQNHPFFRR
SDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSANSGKCL
VEVTVDRNCLEVLPTKMSYAANLKNVMSMQNRQKKEGEEQNVPTEESESSKPGPSAHDLA
AQLKSSLLAEIGLTESEGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVG
AEPGSILTELGGFEVKESKFRREMEKLRNQQSRDLTLEVDRDRDLLIQQTMRQLNNHFGR
RCATTPMAVHRVKVTFKDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTS
LMQRLRNRGERDREREREREMRRSSGLRTGSRRDRDRDFRRQLSIDTRPFRPASEGNPSD
DPDPLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEA
MELIIAHGRENGADSILDLGLLDSSDKVQENRKRHGSSRSVVDMELDDTDDGDDNAPLFY
QPGKRGFYTPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWH
DFAFFDPVMYESLRQLILASQSTDADAVFAAMDLAFAIDLCKEEGGGQVELISNGVNIPV
TPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVN
VQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGF
QPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8442 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgatccacttcgtggtgcacccgctgccgggcaccgaggaccagctcaacgac
cgattaagggaagtttcagagaagctgaacaaatataatttaaacagccacccgcctttg
aatgtgttggaacaggccactattaaacagtgtgtggtgggaccaaatcatgctgcattt
cttctggaggatggtagagtctgcaggattggtttttcagttcaaccagacagattggaa
ttgggtaaacctgagaatagtgatggttcaaagttgagcagtggctcaggggcaggaagg
acatccaggccaggcaggactagtgactccccatggtttctgtctggttctgaaactctg
ggcagactggcaggcaacacccttggaagtcgctggaattcaggggttggtggaagtgga
ggaggatcttctggtagatcatctgctggagctcgagactctcgaaggcagaccagagtt
atacgcacaggacgtgatagaggatctggactgctggggagtcaaccacaaccagtgatt
ccagcatcagtcattccagaggaactgatttcacaggcacaagttgttttacaagggaag
tccagaagtattattattcgagaactccaacgaacaaatcttgatgtaaaccttgctgta
aataatttgttgagtcgtgatgatgaagatggagatgacggggatgacacagcaagtgaa
tcatatcttcctggagaggatcttatgtctcttctggatgctgacatacattctgctcac
ccaagtgtcattattgatgctgatgctatgttttcagaagatattagttactttggttat
ccatcctttcggcgctcatcactttccaggctaggctcatccagagttctccttcttccc
ttagagagagactctgagctgttgcgtgaacgtgagtccgttttacgtttgcgtgaacga
aggtggcttgatggagcctcatttgataatgaaagaggctcaacaagtaaggaaggggaa
ccaaacctggacaagaagaatacacctgttcaaagtcctgtttctttaggagaagacttg
cagtggtggccagataaggatggaacaaagtttatttctattggagctctatattctgag
ctcgtggctgttagcagtaaaggagaactctatcagtggaagtggagtgaatcagaacct
tacagaaatgcacagaatccttcgctacatcatccacgagccatgttcttggggttaacc
aatgaaaagattgtgcttctttctgcaaatagtattagagcaactgttgccacggaaaat
aacaaggttgctacatgggtagatgaaactttaagctctgtagcctctaaattagaacac
actgcacagacatactcagagcttcagggagaacggattgtttctttacattgttgtgct
ctttacacatgtgctcaactagagaacaacttgtattggtggggtgtagttcctttcagc
caaaggaagaaaatgctagaaaaggccagagcaaaaaataaaaagccgaagtctagtgct
ggtatctcctctatgccaaacataactgttggaacccaggtgtgtttaagaaataacccc
ctctatcatgctggagcagttgctttttcaatcagtgctggaattcctaaagttggtgtg
cttatggaatctgtttggaacatgaatgacagctgtcgatttcagcttcggtcccctgag
agcttgaaaaacatggagaaggccagcaaaactaccgaggcaaaacctgaaagcaaacag
gaaccagtgaaaactgagatgggtcctccaccatccccagcttccacttgtagtgatgca
tcttcaatagcaagcagtgcatcaatgccatacaagcgacgacgatctactcctgcccca
aaagaggaggagaaagtgaatgaagaacagtggtctctgagggaagttgtatttgtggaa
gatgttaagaatgttcctgttggcaaggttctaaaagtggatggtgcgtatgttgctgtg
aaatttccaggcacctccaataatgcaaactgtcagagcagttctaactcggatcctgat
ccttcttctctcctccaagactgtaggctgctcaggatagatgaactgcaggttgtaaaa
actggtggaactccgaaagttcctgactgttttcaaagaacacccaaaaaactgtgtatt
cctgaaaaaacagagatcctagcagtaaatgtagattcaaaaggagtgcatgctgttctg
aaaactgggaactgggttcgatactgcatatttgaccttgccacaggaaaggctgaacag
gaaaataatttccctactagcagcattgcattcctgggtcagaatgagagaagtgttgct
atttttacagctggacaggaatcgcctattattcttagagatggaaatggtacaatctat
ccaatggcaaaagattgtatgggtgggatacgagaccctgactggcttgatcttccacct
attagtagtcttggaatgggtgttcattccttaaccaatcttcctgctaactcgaccatc
aaaaagaaagctgctattatcattatggctgttgagaaacaaacattgatgcagcacatt
cttcgatgtgactatgaggcttgcagacaatacctgatgaatcttgaacaagcagttgtt
ttggatcagaatcctcaaatgctgcagacgttccttggccatagatgtgatggaaaccgt
aatattctgcatgcttgtgtgtctgtatgctttccaaccagcaacaaggaaacaaaggag
gaagagggactacctcattcagtgcacaagatggacggtgctcaccgaatggaagcagag
cgctctgaaaggaacacatttgctgaaaggctctcagctgtggaagctattgcaaatgca
atctctgttgtgtcaagtaacggtccaggaaatagggcaggatcatcaagcagcaggagt
ttgagattaagggaaatgatgagaagatccttgagagctgctggattgggcaggcatgaa
gctggtgcttcatcaagtgatcaccaagacccagtttctccaccaatagctcctcccagc
tgggttccagatcctcctgcaatggatccagatggtgacattgattttatcctggccccc
gctgtgggatctcttaccacagcagcgactggcaccggccaaggacccagcacctccaca
ataccaggtccttctacagaaccctctgtagtggaatcgaaggatcggaaggcaaatgct
catttcatactgaaattgctgtgtgatagcgttgttctacagccttatcttcgagaatta
ctgtcagctaaggatgcgagaggcatgacaccatttatgtcagcagttagtggccgagcg
tatcctgctgcaattacaattctagaaactgcacagaaaattgctaaagctgaagcaact
tccagtgaaaaagaagatgatgtgtttatgggaatggtttgtccttctggtacaaatcca
gatgactctcctttgtatgttttgtgttgtaatgatacatgcagctttacctggactggt
gcagaacatattaaccaagatatatttgaatgccgaacatgtggcctgttggaatcactt
tgttgttgcacagaatgtgcaagggtctgtcacaaaggacatgactgcaagctcaaacga
acatccccaacagcctactgtgattgctgggagaagtgcaagtgtaaaacactaattgct
ggacaaaagtctgctcgccttgatctcctttaccgcctgcttaccaccacaaatcttgtt
actatgccaaatagcaggggagaacatctgctgttgtttttagtacagacagttgccagg
caaactgtagagcactgccagtacagaccacctagaatcagggaagatcgtaatcgtaag
actgcaaatcctgaagattctgatatgcctgatcatgatttagaacctcctcgttttgcc
cagctagcactagaacgtgttttacaagactggaatgcactgaagtccatgatcatgttt
ggctcccaggaaaataaagaccctcttagtgcaagcagtaggataggtcatcttctgcct
gaagagcaagtttaccttaatcagcaaagtggaactattcgcttggactgttttacacac
tgccttattgtcaaatgtacagcagacattttgctgttagatactttgttgggtactctg
gtaaaggaactacagaacaagtatactccaggacgcagagaagaggctattgcggttaca
atgagattcctgcgttctgtggcaagagtgtttgtcattcttagtgtggagatggcttcc
tccaaaaagaaaaacaattttattccacagccaattggaaaatgtaaacgtgtgtttcag
gcattattgccctatgctgttgaagagttgtgcaatgtagcagaatctctaattattcca
gtcaggatgggaattgcacgtcctacagcaccctttacccttgctagcactagtatagat
gccatgcagggaagtgaagaactattttctgtggagcctctgccacccagaccatcatct
gaccagtctagcagttctagtcaatctcagtcatcctacataataaggaatcctcagcaa
agacgaatcagccagtcacaaccagttcgtggcagggatgaagaacaagatgatattgtt
tcagctgatgtagaagaggttgaggtggttgagggggtggcgggtgaagaagaccatcat
gatgaacaggaagaacatggtgaagaaaatgctgaagcagaaggacagcatgatgagcat
gatgaggatggcagtgatatggagttggatttgctagctgctgctgaaacagaaagtgac
agtgagagtaaccacagtaaccaggacaatgccagtgggcgcagaagtgttgtcactgca
gctactgctgggtcagaagcaggagctagcagtgttccagcatttttttctgaagatgac
tctcaatcaaatgattccagtgactctgatagcagcagcagtcagagtgatgacatagag
caggaaaccttcatgcttgatgagcctctggagcggaccacaaatagctcccacgccaac
ggtgctgcccaggctccccgttccatgcaatgggctgttcggaacacccaaaaccagagg
actaccagcacagctccctctagtacgtcaaccccagcagcaagttcagcaggcttgatt
tatattgatccctcaaaccttcgtcggagtggtaccatcagtacgagtgctgcagcagct
gctgcagcacttgaagccagcaatgcaagcagctatttaacatctgcaagcagcttagca
agagcatacagtattgtgatacggcagatatctgatctgatgggtctgattcccaaatac
aaccacttagtgtactcccagattccagctgcagtgaagctgacttaccaagatgcagtt
aacttgcagaattatgtggaagaaaagcttattcctacttggaattggatggtcagtatc
atggactctactgaagctcagctgcgttatggctccgcattatcttctgctggtgatcct
gggcatccaaatcatcctctccatgcttctcagaactcagctagaagggaaaggatgaca
gcccgtgaggaagccagcttgagaacacttgagggaagaagacgtgctactttgctcagt
gctcgtcagggaatgatgtcagcacgcggtgatttcctgaactacgcgctgtccttgatg
cgttctcacaacgatgagcactcggatgttcttcctgttctagatgtctgctcactaaag
cacgtagcatatgtttttcaagcccttatttattggattaaagcaatgaatcaacagaca
acattggatactcctcagctggaaaggaaaaggactcgtgagcttttggaactgggtctt
gacaatgaagattcagaacatgaaaatgatgatgataccaatcaaagtgctacactcaat
gacaaagatgatgatgccctcccagcagagactggccaaaaccatccatttttcagacgg
tcagactctatgacattccttggctgcatcccacccaatccttttgaggttcctctggca
gaggccatccccttggcagaccagccacatctattacagccaaatgctcgcaaagaggat
ctgtttggccgacccagtcagggtctgtactcatcttctgccaacagtggcaagtgctta
gtggaagttacagtggacagaaactgccttgaggttcttccaactaaaatgtcttatgca
gccaacttaaaaaatgttatgagcatgcaaaatcggcagaagaaggaaggggaagaacaa
aatgtgcctacagaagaatctgagagttcaaaaccggggccttcagctcatgatcttgca
gcacaattgaaaagcagcttgttggcagagataggattgacagaaagtgaagggccaccc
ctcacatctttcaggccacagtgtagcttcatgggcatggttatttctcatgacatgttg
ctgggacgttggcgcctttctctggagttatttggtagagtattcatggaagatgttgga
gcagagcctggatcgatcttgactgaattaggtggctttgaagtaaaggaatcgaaattc
cgcagggagatggaaaaacttagaaaccagcaatcaagggatttaacattggaggttgat
cgagacagagatcttctaattcagcagaccatgaggcagctcaacaatcactttggtcgc
aggtgtgctaccactccgatggctgtacacagagtgaaagttacttttaaggatgagccc
ggagaaggcagcggtgtagcacgaagcttttatactgctattgcacaggcttttctgtca
aatgagaaactgccaaatctagattgcattcagaatgccaacaagggtacccatacaagt
ctcatgcagagattgcgaaataggggagagagagatcgggaaagggagcgagagagagaa
atgcggagaagtagtggcttgcgaactggttctcggagagatagggatagggacttcaga
agacaattgtccattgacacacggccttttagaccagcatcagaaggaaatcctagtgat
gaccctgaccctctcccagcacacaggcaagcccttggagaacggctctaccctcgagtg
caagcaatgcaaccagcatttgcaagcaaaatcacaggaatgttgttggaattgtctcct
gctcagctgcttctgttactagctagtgaagattcccttagagcaagagttgatgaagca
atggaactcattattgcacatggcagggagaatggtgctgacagtatattggatcttgga
ttgctagactcttcagataaagtgcaggaaaacagaaagcgacatggatccagccgcagt
gtagtagatatggaattggatgatacagatgatggggatgataatgcaccacttttctac
caacctggaaaacgaggattttatacaccaagacctggtaaaaacacagaagcaaggctg
aattgtttccgaaacattggcagaatcctaggattgtgcttgttgcagaatgaactatgt
cccatcacgttaaatagacatgtaatcaaagttctacttggcagaaaggtgaactggcat
gattttgcttttttcgatccagttatgtatgaaagccttcggcaacttattctcgcttcc
cagagtacagatgctgatgcagtgtttgcagcaatggatttagcctttgcaatagacctg
tgtaaggaggagggtggagggcaggttgaacttatttccaatggtgtaaatataccagtc
actcctcagaatgtatatgagtatgtccggaaatatgcagaacaccgaatgttggtagta
gcagagcagcctctacatgcaatgaggaagggactcttggatgtacttccaaagaattca
ttagaagatttgacagcagaagatttcagacttctggtaaatggctgtggtgaagtaaat
gtgcaaatgctaatcagctttacctctttcaatgatgaatcaggagaaaatgctgagaag
cttttgcaattcaagcgttggttttggtccatagttgagaagatgagtatgacggaaaga
caagatctggtttacttttggacctcaagtccatcattgcccgccagtgaggaggggttc
cagcctatgccatccatcacaataaggccaccagatgaccaacatcttccaacagcaaac
acttgcatttctcgcctttatgtcccactctattcctctaagcagattttgaaacaaaaa
ttgttactcgccattaagaccaagaattttggttttgtgtag
DBGET
integrated database retrieval system
