Lonchura striata domestica (Bengalese finch): 110471505
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Entry
110471505 CDS
T05897
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X2
KO
K06795
brevican
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lsr00535
]
110471505 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
lsr00536
]
110471505 (BCAN)
04091 Lectins [BR:
lsr04091
]
110471505 (BCAN)
Proteoglycans [BR:
lsr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
110471505 (BCAN)
Glycosaminoglycan binding proteins [BR:
lsr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
110471505 (BCAN)
Lectins [BR:
lsr04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
110471505 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
ig
Izumo-Ig
I-set
Ig_3
ArAE_1_C
EGF_2
Motif
Other DBs
NCBI-GeneID:
110471505
NCBI-ProteinID:
XP_021387865
LinkDB
All DBs
Position
25:2760675..2782501
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AA seq
865 aa
AA seq
DB search
MAPALPPPLLLLWVFVPTVVPQAFGPGDGTEDLKALQVSIPRQPALDAVLAGDITIPCLI
SYLGPPPSGGRRAVLGTPRVKWTFISEGREAEILVARGDRVKVSEDYRLRASLPIFHRRY
TNASLLLTELRPNDSGIYRCDVQHGIEDGHAILHLKVKGVVFHYREGSMRYAYTFAEAQE
ACARIGASIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIQTPREACYGDMNGFPGVRNY
GVVDPEDMYDVYCYAEDLPGEIFLETAPARFTLEEAAQRCRALGAELASPGQLYAAWNAG
LDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFLFRNQTGFPDAQSRYDAYCFREGT
NSFPEAAGKYRAQEPEENLLQEIVTVAEKLEELQLPRAHVEIESRGAIYAVPFFGDTDVG
KPSQSPEDALGPGARHPPLATSVSSEEAQGAAPGGGPGSAAAESPGGGRDPGQPTEPEGP
TAAPAESRGAGGSPRRGQNSGGASTPFSAAEDAELSGDAVERPGASPLPPAPRQPQDEAE
EQSGAAWLPSPAAPGHRSAVPAATPWHAELPGGSSSAPALAGEEAAPPPPGTDRGMPAAA
SEEEEEEEEEEQPAPSIASVEGFIAAVPGEAGGCVPNPCLNGGTCVEDGAQLACVCLPGY
GGGSCERPLRSCSPGWDSFQGACYRHFSTRRSWEDAESQCRHHGGHLAAILTPEEQDFIN
DQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWS
DVPCNYHLSYTCKMGLVQCGPPPVLSDARAFGKAKQRYEIGSTARYRCRAGLAPRRSPVI
RCREDGTWEPPQLACRPGVAQPPHN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggccccagccctgccgccgccgctgctgctgctctgggtgtttgtccccaccgtggtc
ccgcaggcgttcggccccggagatggcacagaggacctcaaggctctgcaggtgtccatc
ccacggcagccagccctcgacgccgtgctggcaggcgacatcaccatcccctgtctcatc
agctacctcggccccccgccctcgggcggccgccgggcggtcctgggcaccccccgggtc
aagtggaccttcatctctgagggcagggaggcggagatcctggtggctcggggggaccgg
gtgaaggtgagcgaggattaccggctgcgcgcctccctgcccatcttccaccggcgctac
accaacgcctccctgctgctcaccgagctgcgccccaacgactcgggcatctaccgctgc
gacgtgcagcacggcatcgaggacggccacgccatcctccacctcaaagtcaaaggggtg
gtgttccactaccgggagggctccatgcgctacgcctacaccttcgccgaggcgcaggag
gcttgtgccaggatcggtgccagcatcgccacccccgagcagctctacgccgcctacctg
gggggctacgagcagtgtgacgccggctggatcgccgaccagaccgtcaggtaccccatc
cagacaccccgcgaggcttgctacggagacatgaacggcttccctggggtgaggaactac
ggcgtggtggacccggaggacatgtacgatgtgtactgctacgctgaggacctcccaggg
gaaatctttctggagacggccccggcgcggttcacgctggaggaggcggcgcagcgctgc
cgggcgctgggcgcggagctggcgagcccgggccagctgtacgcggcctggaacgcgggg
ctggacgcctgcagccccggctggctggccgacggcagcgtccgctaccccatcgtcacc
ccgcgggagcgctgcggcggggctctgcccggcgtcaaaaccatcttcctcttccgcaac
cagacgggattccccgacgcccagagccgctacgatgcctactgcttccgagaagggaca
aactctttccctgaggctgcaggaaaataccgagcccaagagcccgaggagaatctcctc
caggagattgtcacagtggcagaaaagctggaggagctgcagctgcccagagcgcacgtg
gagattgagtcgcgaggggccatttacgccgtccctttctttggggacactgatgtggga
aagccgagccagtcccctgaagacgccctggggccaggcgcccggcatcccccactagcc
acctccgtgtcctcagaggaggcgcagggagcagcgccgggcgggggccccggcagcgca
gcggcggagagcccgggcggagggcgagaccccggccagcccacggagccagagggaccc
acggctgccccagcagagagccgaggagccggcgggagcccccgccgcgggcagaactcc
ggcggggcgagcacccccttttctgccgctgaggacgccgaactctccggagacgcggtg
gaaaggcccggggcgtccccgctgccccccgcgccccgccagccgcaggacgaggcagag
gagcagtcgggagccgcgtggctcccctcgcccgccgccccggggcaccgcagcgctgtg
cccgcagcgaccccgtggcacgcagagctccccggcggcagcagcagcgccccggccctg
gcaggagaggaggcagcgccgccgccgccgggcacagaccgcgggatgcccgctgcagct
tccgaggaggaggaggaggaggaggaggaagagcaacctgctccctccattgccagcgtg
gagggtttcattgcagccgttcctggagaagcaggtggctgcgtccccaacccctgcctg
aacggagggacctgcgtggaggacggcgcccagctcgcctgcgtgtgcctgcctggctac
ggaggcggcagctgtgaaagacccctgcgcagctgcagccccggctgggacagcttccag
ggagcctgctacaggcacttctccacgcggaggagctgggaggacgcagagagccagtgc
aggcaccacggggggcacctggccgccatcctgacccccgaggagcaggacttcatcaac
gaccagtacagggaataccagtggatcggcttgaacgaccgcaccatcgagggggatttc
cagtggtctgacgggagccccttgctctacgagaactggcaccccgggcagcccgacagc
tacttcctctcgggggagaactgcgtggtcatcgtgtggcacgatgggggccagtggagc
gacgtgccctgcaactaccacctgtcctacacctgcaagatggggctggtgcagtgcggg
ccccctcccgtcctgagcgacgcccgcgcctttggcaaagcaaagcagcgctacgagatc
ggctccaccgcccgctaccgctgccgcgccgggctcgccccgcgccgctcgcccgtcatc
cgctgccgggaggacggcacctgggagcccccgcagctggcctgccgtcccggcgtggct
cagcccccccacaactga
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