Lonchura striata domestica (Bengalese finch): 110471991
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Entry
110471991 CDS
T05897
Symbol
KIAA1217
Name
(RefSeq) sickle tail protein homolog
Organism
lsr
Lonchura striata domestica (Bengalese finch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIP3
Motif
Other DBs
NCBI-GeneID:
110471991
NCBI-ProteinID:
XP_021388799
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All DBs
Position
2:complement(17760389..17991576)
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AA seq
1999 aa
AA seq
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MSKPSRLARPVSANTAPKSPLSRKEDFNSRSRKIRLGEKILRAGSEGNLVKQHQQEQVEI
TERLVPRRAPFLKDQAKPSLHVTSLDDAECLRSKELLSTPSSHTSSSSKSTRNIPRRHTV
GGPRSSKEILGMQTSEMDRKREAFLEHLKQKYPHHATAIMGHQERLRDQTRSPKLSQSPQ
PNLGDHTEHLSEASADSLEAMSEGDSPTPFSRGSRTRASLPVVRSANQTKERSLGVLYLQ
YGDETKQLRMPNEITSTDTIRALFVSAFPQQLTMKMLESPSVAIYIKDESRNIYYELCDV
RNIQDRSFLKVYNKDPAHAFNHTSRAVNGDIRMQREIAYTGRDGQSGSRPGSAPHPLHAM
PSSPPSTPVPHSMPPSPSRIPYGGGRPMGVPGNATIPRDRLSSVPASRSISPSPSAILER
RDVKPDEDMGNKNLTLMRNESLYGDPYLFHEGRMSVAAPHSGHPLDVPDHIVTYHRSAMR
SSSTYCNPSMQPEMLEQSLYRQKSRKYPESHLPTLGSKTPPASPHRVADMRMIDIHPHHG
PHIPAHTIQPDRSSPSRQSFKKEPGPPVFVDAKARNAVGLPGMAEAMPSPMDKQAFGYGS
PTMPKDKETRERIQAMEKQIASLTGLVQSALFKGPNTSNSKDSSSEKMMKIVSSKSSTDT
AGAASISGGKNAVGAVESAVTHHPAGAPAMHLSLHGMKRNVSDLRLQLHQMKQLQLQNQE
MLRAMVKKAELEINGKVIETVKRLEDPVQRQRNLVEQERQKYLSEEEKIVKKLCELETFV
EDLKKDSAASSKAVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRF
LKEEPHKLDSLLKRVRSMTDVLTLLRRHVTEGLLRGADPSQAVQYSATEKSTAADTLKSQ
EEHKPTQGHAQQNLTAIPSESQVPSVKSEVIPFSAMTVHHVQSSPVVIQQSQHSAALVPH
GQGSPSAGSHGEAVPAGAHPAATPAPQEPTAGSQPAQATPAPQVSVNGTTMQSLFIEEIH
SASTRNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPQPAAL
PKGDAAEKLEVSEEAPDGEQDNDKLTKSPPPPPPRRSYLPGSGLTTTRSGDVIYTARKEA
AALKECSEDAGQIAQSKAPKEDQALSRSTGHAVAPAAKDEEEEEGDKIMAELQAFQKCSF
MDVNSNSHAEQSRNDTHVKDIRPGTLMHHKEKKVYGATTGSPTDSDHPKEKREGRTEEEL
GSDSSSTADNKSGFSMNDSPTFSKGLFVDSTDYSNKNLQNMSINLSSIGLPEEDKRRGAQ
DILGSHFPAVETGKQKPNYRLSRDALQGVPQGEALQSTGKHIPISSVAPLLRHMQEAAGP
QPSLQEQEVSAGNYNQVVLRPKVSRANSVSSIEETDSPASSPSEDNPPTENIAFMITKTA
VQVLSSGEVHDIVSRKGGDVQTVNIDTRKDVASEKGIPENMDSEEPVVCLDKKPVIIIFD
EPMDIRSAYKRLSTIFEECDEELEKMMTDEKIEEEEEEEENEAREVSERQKEESPVANDR
KATTEHSAAHGPQGPYLFNLRSDSAEGRPPVEEESTKTNFNKYRQIYGLNTEANSDSADQ
LASRQDSKKKFKFKFPKKQLAALTQAIRTGTKTGKKTLQVVVYEEEEEDGTLKQHKEAKR
FEITRSQSEESDKSPSGKQEGRSGAAVSLSRTDEIRQSTYRTLDSLEQTIKQLENTISEM
SPKPVPENTYTSEGSFVPFSAQIVPETPSREHVVLDESLAGVEPPASLPATSRKGSSAAS
QTSRMPVPMASKTRQGSMEKSGKQHKLQDPRQYRQANGSAKKAGGDYKATSPTLPASKIP
AFSPTSGKSSSAPASSGDSSNPLNPPTKTSIPSSSLLGPQTGRITYSTSLIPSVSNGSSK
LQSPTYPGKGHHLSFSLQTQNGRPPPPSSSTSPPSSISPPSLSQGMKSIRTIHTPSFNSY
KAQNGNASKSAPSTVKEPS
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccctctcgcttggctcgacctgtgtcggctaatacagctcctaaatcgcct
ttgtctaggaaagaagattttaacagccgatcacgaaaaattaggctaggtgaaaagatt
ttgcgagctggcagcgaaggaaacctggttaaacagcatcagcaagagcaggtggaaatc
acagaaaggcttgtgccacggagggctccttttctgaaagaccaggcaaaacccagtttg
catgtaacatcactagatgatgcagaatgtctccgatctaaagagctcctttcgaccccg
agcagccacacttcttctagttcaaagtccacccgcaacatccctcgaagacatacagta
ggtggccctcgcagttccaaagaaatactgggaatgcaaacctcagaaatggacaggaag
agagaggcttttcttgagcatctgaaacagaaatatccccaccatgccacagcaataatg
ggacaccaggagagactaagagatcagacaagaagcccaaagctgtcccagagcccacag
cccaatttgggtgaccacacagaacacctctctgaagcatctgctgattccttagaggcc
atgtctgaaggtgattctccaacccccttctcgaggggcagccgcacgcgggcaagtctt
cccgttgtgcggtcagcaaaccaaacaaaggaaagatcactgggtgtattatatcttcag
tatggagatgaaacaaagcagttgaggatgccgaatgaaatcacaagcacagacacaatt
cgtgccctttttgtaagtgccttcccccagcagctgacaatgaaaatgctggaatcgccc
agcgttgccatttacatcaaggatgagagcagaaacatatactatgaactgtgtgatgtg
aggaatattcaagaccgatctttccttaaagtttacaacaaagaccctgcacatgcattt
aatcacacttccagagctgtaaatggagatataaggatgcagagggaaattgcttatacg
gggcgagatggccaaagtggttctcgccctggttctgccccacaccctctgcatgcgatg
cccagctcaccaccctccaccccggtgccccactccatgcctccctctccatccaggatt
ccctatggtgggggccggcccatgggtgtgccaggcaatgccaccatccccagggaccgg
ctgtccagcgtgccagcctcgcgctccatatcgcccagcccaagcgccattctggagaga
cgggatgtgaagccggatgaggacatgggtaacaaaaaccttaccctgatgcgaaatgaa
agcctgtacggggacccctacttgtttcacgaggggaggatgagcgtggctgcaccgcac
tccggacaccccctggatgtccccgatcacattgtgacctaccatcgcagtgccatgagg
tcatcgagcacttactgcaacccatccatgcagcctgaaatgctggagcagtccttgtac
agacaaaagtcacggaagtacccggagagccatttgcccactctcggctctaagacgcct
ccagcctcaccccacagggtggccgacatgagaatgatcgatattcatcctcaccatggc
cctcacattcccgcccacaccatccagccggacaggtcttctcccagccgccagtccttc
aaaaaggagccgggaccgcccgtgtttgtggatgcgaaagcgcggaatgctgttggcctg
ccaggcatggccgaggcaatgccctctcccatggacaagcaggcttttggctatgggtca
cccacgatgcccaaggacaaggagacaagagagaggatacaagccatggagaaacagatt
gccagtttaactggtcttgttcagtctgcgctttttaaagggccaaatacaagtaatagc
aaagattcttctagtgagaagatgatgaaaattgtgtccagcaagagcagcactgacact
gcaggtgctgccagtatatctggggggaagaatgcagtgggagctgtggagtcagctgtc
acccaccaccccgctggagccccagcaatgcacctcagcctgcatggcatgaaacgcaac
gtgtcggacctgcggctgcagctgcatcagatgaagcagctacagctgcagaaccaggag
atgctgagggcaatggtgaagaaagcagagctagaaatcaatggcaaagtgatcgaaaca
gtgaagaggcttgaagatcctgtgcagcgacagcgcaacctggtggaacaagagaggcag
aagtacctcagcgaggaagaaaagattgtaaagaagttatgtgagctggagacatttgtt
gaagatctgaagaaggactctgctgcttccagcaaggcagttacactgaaagacgttgaa
gatggagcctttcttttgcgtcaagtgggagaagctgttgctaccctgaaaggagagttc
ccgacactgcaaaataaaatgcgagcgatcctgcggattgaggtagaagcggtgaggttc
ctgaaggaggagccacacaagctggacagcctgctgaaacgtgtgcgcagcatgaccgat
gtgctcaccctgctcaggagacatgttacagaaggactgctgaggggtgcggatccatcc
caagctgtgcaatactctgctacagaaaagtccactgcagctgacactctgaaaagccaa
gaggagcacaagcccacccagggacacgcacaacaaaacctgacagcaatcccatccgag
tcccaggtgccatcggtcaagtcagaagtcatccccttctcagccatgaccgtccaccac
gtgcagagctcgcctgttgtcatccagcagtctcagcactcggcagccctggtcccccac
ggccagggctctccctctgcaggcagccacggtgaagctgtgcctgcaggagctcaccct
gcagccaccccggccccgcaggagcccacggcaggatcccagcccgcacaagccacacca
gcaccacaggtctctgtcaatggcaccaccatgcaaagccttttcattgaggaaattcac
agtgcaagtaccagaaatcgagctgtatcaattgagaaagctgaaaagaagtgggaagag
aaaagacaaaaccttgatcactataatggaaaggaatttgaaaagctcttggaggaggcc
caggccaatataatgaagtccattcctaacctggagatgcctccccagccagcagccctg
cctaaaggagatgcagcagaaaagctagaagtctcagaagaagctcctgatggagaacag
gacaatgacaagctgaccaagtctccacctcctccacctccacggcgcagttacctgcca
gggtcagggctgaccacaacgagatcaggagatgtcatctacacagccagaaaagaggct
gctgctctcaaggaatgcagtgaagatgctgggcaaatagcacaatccaaagcccccaaa
gaggaccaggctttgtctcggagcacagggcatgctgtagcaccagctgcaaaagatgaa
gaggaagaggaaggagataaaataatggcagaattacaggctttccagaagtgctctttt
atggatgtaaactcaaacagtcatgctgaacagtccagaaatgatacacatgttaaagac
ataaggcctgggactttaatgcatcacaaggaaaagaaggtgtatggggctacaacagga
tctcccacagatagtgaccatcctaaagagaagagggaagggagaactgaagaagaattg
ggttctgattcatccagtacagctgacaataaaagtggcttttcaatgaatgacagtcct
acatttagcaagggtttgtttgtagacagtacagactattctaacaaaaaccttcagaat
atgagcataaacctgtctagcatcggtttgccagaggaggacaaacgaagaggggctcaa
gatatcttaggatcacattttccagccgttgagactggaaaacaaaagccaaactacaga
ctgtcaagagatgctctccagggtgtgcctcagggtgaagccttgcagagcacaggcaag
cacatccccatcagcagcgttgcccctctcctgaggcacatgcaggaggctgcggggcct
cagccttccttgcaggagcaagaagtgtctgcaggcaactacaatcaggttgtgctgaga
cccaaagtgtccagagcaaacagcgtgagcagcattgaggagacagactctccagccagc
tctccaagtgaagacaacccacccacagaaaacattgccttcatgattaccaaaacagcc
gtgcaggtgctctcgagtggggaagttcacgacatagtgagccggaaaggaggagatgtg
caaacagtcaacatcgacacgaggaaggatgtggcatctgagaagggcatccctgagaac
atggacagcgaagagcccgtggtgtgtctggacaaaaagcctgtcatcatcatttttgat
gaaccgatggatattaggtcagcgtacaaacggctttctaccatttttgaggaatgtgat
gaggaattggaaaaaatgatgacagatgaaaagatagaagaagaagaggaggaggaagaa
aatgaagcacgtgaagtctctgagaggcagaaggaagagtcaccagtggctaatgacaga
aaagcaaccacagagcattctgcagctcatggtccccaggggccatacctatttaacctt
cggtctgactctgcagaaggcagacctcctgtagaggaggaaagcacaaagacaaatttc
aacaaataccgtcagatctatgggctaaacacagaagcaaactcagactctgctgatcag
ttggcaagcaggcaggattctaagaaaaaatttaaatttaaattccctaaaaagcagctg
gctgctctgacgcaggcaatacggacaggaaccaagactgggaagaagaccttgcaggtt
gtggtctatgaagaagaggaggaagatgggaccctgaagcagcacaaggaagcaaagaga
tttgaaatcactaggtctcagtctgaggagagtgataaaagtccttctgggaagcaagag
ggacgctctggagctgcagtgtccctgtctaggactgatgaaattcgacagagtacatac
agaacgctagacagccttgagcagactataaagcagctggaaaacaccatcagtgaaatg
agtccaaaacctgtccctgaaaacacatacacctctgagggaagctttgtccccttctct
gcccagatagtaccagagaccccatcccgagagcatgtagtgctggatgagagccttgct
ggtgtagagccccctgcatcactcccagccacttcacgtaagggctccagcgctgcctcc
cagacaagccggatgccagtccccatggcttcaaaaactagacaaggaagcatggagaaa
tcaggcaaacagcacaagctgcaggatccacgccaatacagacaggctaatggaagtgct
aagaaagctggtggggactataaggctacttctcctaccctacctgcttctaagatccca
gccttttctcccacttctgggaaaagcagctcagcacctgcttctagcggtgacagctct
aaccctcttaatccacctactaaaacctccattccttcctcctcccttctcggtcctcag
acaggtcgcataacttactctacctccctcatcccctctgtctctaatggctcctccaag
ttgcagagccccacttacccagggaaaggtcaccacctctccttctcgctgcagactcag
aacggccgaccaccccctccttcctcctctacctcccccccctcctctatctccccccct
tccctgagccaaggtatgaagagcatcaggacaatccacacccctagtttcaacagctac
aaggcacagaacgggaatgccagcaagtccgccccatccacggtcaaggagccatcctaa
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