Lonchura striata domestica (Bengalese finch): 110473306
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Entry
110473306 CDS
T05897
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103 isoform X1
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110473306
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110473306
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110473306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-Nse
zf-C3HC4_4
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
110473306
NCBI-ProteinID:
XP_021391407
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All DBs
Position
4:complement(65952060..65985817)
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AA seq
686 aa
AA seq
DB search
MWVKLCCLLLYFLALFVLARVFEAVAWYESGFLATQLVDPVALSFRKLRTILECRGLGHS
GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL
VQVIANDRSPLVGKVHWEKMVKKVSRFGIRTGTFNCSSDPRYCKRRGWLKSTLIMSVPQT
STSKGKVMLKEYSGRRIEVEHIFKWITAHAASRIKTIYNSEHLKEEWNKSDQYRVKIYLF
ANLDQPPAFFSALSVKFTGRVEFIFVNVENWDNKSYMAEIGIYKTPSYILRTPEGIYRYG
NNTGEFISLRAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL
GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLFRYSNTTTLASWVRADWMFYSSHPALF
LSTYLGHGLLIDYFEKKRRRNNNMDEVNANNLEWLSSLWDWYTSYLFHPIASFQHFPFDS
DWDEDPDLLLERLAFPDLWLHPLIPTDYIKNLPMWRFQCLSSHSDEEMLETFPDSESDSE
SENKEVFSSDREVSEDDELSTFHRCSEGERQGGAEACSCATHSCHHEPCERQARSYSSYS
SAGDLEPDWSAWPSDMLHCTECVVCLENFAKGSLLMGLPCGHVFHQNCIMKWLAGGRHCC
PVCRWASYKKKQPYTHPQPLSSEPPS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaagctgtgctgtttgctgctctacttcctggcgctcttcgtgctggcccgg
gtgttcgaggccgtggcgtggtacgagagcggcttcctcgccacgcagctggtggacccg
gtggcgctgagcttcaggaagctgcggaccatcctggagtgccgcgggctggggcactcg
gggctgcccgagaagaaggatgtgcgggagctggtggagaagtcaggagacctcatggaa
ggagagctttattcagctctcaaggaggaagaggcctctgaatcggtttccagtacaaac
ttcagtggtgaaatgcatttctatgagcttgtagaagatacaaaagatgggatctggctg
gtacaggtcatagcaaacgacagaagcccactggtgggtaaagtccattgggagaaaatg
gtgaagaaagtctcaagatttggcatacgtactggcacttttaactgttccagtgacccc
agatactgcaagaggaggggttggctgaaatccaccctcattatgtcggttccacaaacc
agtacctccaagggaaaagtcatgctaaaggaatacagcgggcgcaggattgaagtggag
cacatcttcaaatggatcacagcccacgctgcctctcggatcaaaaccatctacaactcg
gaacatttgaaagaagaatggaacaaaagtgaccagtaccgggtgaaaatatacctgttt
gccaacctcgaccagcctccggcgttcttctctgcactaagtgtaaagtttactggaaga
gtagagtttatttttgtcaacgtggaaaactgggacaataaaagttacatggcagaaatt
ggtatctacaagacaccatcatacatactgaggactcctgaggggatttacaggtatgga
aataacactggtgaatttatatcactacgtgccatggattcctttttgcgctcgttgcaa
ccagaagttaacgatttatttgttttaagtttagttttggttaatctgatggcttggatg
gacctgtttattacacaaggcgccactataaagcgttttgtggttcttataagcacttta
gggacgtataattcactattaattatttcctggctgccagtgttaggttttttgcaacta
ccctacttagacagcttttatgagtacagtttaaaactcttcaggtactctaacacaact
actttggcttcttgggtgagggcagattggatgttctactcttctcatccagccctcttc
ctcagcacgtaccttggccacggtttgctaattgattactttgagaagaagcgaaggcgc
aataacaacatggatgaagtaaatgctaataatctggagtggctgtcgagcctgtgggac
tggtacaccagctacctgtttcatcccattgcttcttttcaacacttcccttttgactca
gattgggatgaagacccggatttgttgctagagcggttggccttccccgatctctggctt
caccctctgataccaactgattatataaaaaacttacccatgtggaggtttcaatgcctc
agctcccactctgatgaggaaatgctggaaacctttccagacagcgaaagtgactctgag
agtgaaaacaaagaggtcttcagtagcgacagagaggtctcggaggacgatgagctgagc
acgttccacaggtgcagcgagggagagcgtcagggcggcgctgaggcgtgttcatgtgcc
actcactcttgtcaccacgagccatgcgaacgccaggccaggtcctacagctcatacagc
tccgcaggtgacctggagccagactggtcagcctggccctctgacatgttgcactgtacg
gaatgcgtggtgtgtctagaaaattttgcaaagggctccctgctgatgggcttgccctgt
ggccacgtgttccaccagaattgcatcatgaagtggctggcaggcgggcgacactgctgt
cccgtctgcaggtgggcgtcctacaaaaaaaagcagccatacacacaccctcagcctttg
tcgagtgagcccccatcttag
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