Lonchura striata domestica (Bengalese finch): 110474210
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Entry
110474210 CDS
T05897
Symbol
PIGB
Name
(RefSeq) LOW QUALITY PROTEIN: GPI mannosyltransferase 3
KO
K05286
GPI mannosyltransferase 3 [EC:2.4.1.-]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
lsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
110474210 (PIGB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsr01003
]
110474210 (PIGB)
Glycosyltransferases [BR:
lsr01003
]
GPI-anchor biosynthesis
Core oligosaccharide
110474210 (PIGB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
110474210
NCBI-ProteinID:
XP_021393088
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Position
10:complement(7872808..7880749)
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AA seq
598 aa
AA seq
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MPAGGAATPTDTRGAGAHCDAAPARLRPAAPAPSPARGTRHSPGLARLRAPDGSTGAVPP
PAVAHAPAGQAAGELRXRMPEAVRLRKRRSVLYSSAGGAAAQRGAGAAAPAPLLALALAL
RTLNCFLVQTSFVPDEYWQSLEVAHRMVFNYGYLTWEWTSSLRGYSYPLIFASMYKALQL
LAKDNVQLLIWVPRLAQAVLAAFADVKLYSLVQHLENSETAKFVFFCQLCSWFTWYSCTR
TLTNTMETILSIFALSFYPIKGSKMGNSCKYLALVALAIVIRPTAVILWMPLVFSHFLQE
QRKTDLILYNCIPVGLVTVGTSLIIDRVFFGEWVLVQLNFLKFNVMQNLGTFYGSHPWHW
YFTQGLPVVLGPHLPFFIHGCALAPRRFHVLLLAVIWTVLVYSTLSHKEFRFIYPVLPFC
MIFCGYSLKYLKAWKKTTASFLLLSNLIPALYTGLVHQRGTLDVMSHIQQLCNHSQQSQA
FVFILMPCHSTPFYSHVHCPLKMRFLQCPPDLTGNASYVDEADMFYSNALGWLNKEFYND
TLLPSHLILFNVLEKEISSFLALRDYEKTATVFHTHVPQGRVGSHISIYRRKTEMNFL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgggcggcgctgccacgcccacggacacgcgtggggcgggcgcgcactgcgac
gcggccccggctcggctccggcccgcggccccggcgccctcacctgcacgcgggacgcgg
cacagccccggcctcgcccggctgcgggcaccggacggaagtaccggcgctgtcccgcct
cccgcggtcgcgcatgccccggcggggcaggcggccggggagctgcggnngcggatgccg
gaggcggtgcggctccgcaagcggcggtcggtgctgtacagctcggccggcggggccgcc
gcgcagcgaggcgccggtgcagccgcgcccgccccgctgctggcgctcgccctggcgctg
cggacgctcaattgcttcctcgtgcagaccagcttcgtgccggacgagtactggcagtcg
ctggaagtggctcatcgcatggtcttcaattatggttacctgacttgggaatggacaagt
agcttaaggggctactcgtacccactgatctttgcaagcatgtacaaagcattacagctg
ctggctaaggataatgtccagctgctgatctgggtccctaggcttgcacaggcagtgctg
gctgcttttgctgatgtgaagctttactcattagtgcaacaccttgaaaattcagaaaca
gcaaagttcgtgttcttctgccaactctgttcctggtttacatggtattcctgtaccaga
actctaacaaacaccatggagactattcttagcatttttgctctttccttctatccaata
aaaggctccaagatggggaacagctgtaagtatttagctttggttgcacttgcaattgtt
attcgtcccactgctgttatcctgtggatgcctttggtcttcagccattttttgcaagaa
cagaggaaaacagatcttatcctatacaactgcattccagttggattggtcacagtagga
acctctttaataattgaccgtgtgttttttggtgagtgggtactggttcagctgaacttc
ttgaaattcaacgtgatgcagaatttgggaacattttatggctctcacccttggcactgg
tacttcactcagggactcccagttgtcttgggtccccatctgccattctttattcacggc
tgtgcactggcaccaaggaggttccatgtccttctgctggcagtgatctggacagtgctg
gtgtacagcacactgagccataaggaattcaggttcatctatccagtactgccattctgc
atgatattttgtggatattctttgaaatatctgaaagcatggaagaaaactacagcaagt
ttcctgctgttatccaatttaatcccagctctgtacacaggcttggttcaccagcgaggc
actctggatgttatgagtcacatccagcagctctgcaatcactctcagcagtcacaagcc
tttgtcttcatcctgatgccatgtcactctactccattttacagtcatgttcactgtcct
ctaaaaatgagattccttcagtgtcccccagacctaactggcaatgcgagctacgttgat
gaagcagatatgttttactctaacgcacttggctggctgaataaggagttttacaatgac
acattattacccagtcacttgatcctcttcaatgtgctagaaaaggaaatatcatcattt
ctagctttaagggactatgagaaaacagccactgtctttcatactcatgtacctcaagga
cgagttggaagccacatctccatctacaggagaaaaactgaaatgaattttctctga
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