KEGG   Lonchura striata domestica (Bengalese finch): 110479256
Entry
110479256         CDS       T05897                                 
Symbol
SBF1
Name
(RefSeq) myotubularin-related protein 5
  KO
K18061  myotubularin-related protein 5/13
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsr01009]
    110479256 (SBF1)
Protein phosphatases and associated proteins [BR:lsr01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Dual specificity phosphatases)
   Myotubularins
    110479256 (SBF1)
SSDB
Motif
Pfam: SBF2 Myotub-related DENN uDENN PH dDENN GRAM PH_11 SPA PH_2 PH_8
Other DBs
NCBI-GeneID: 110479256
NCBI-ProteinID: XP_031362414
LinkDB
Position
1A:151601..225164
AA seq 1877 aa
MARLADYFVLVGYDPGKRGSGDGQGQILQRFPEKDWEDNPFPQGIELFCQPSGWQLFPER
NPPTFFVAVLTDINSERHYCACFTFWEAVESPQPQSQARNGEGEEEEEEASSPAQPAQLF
APKSLVLVSRLDHAEVFRNSLGLIYTIYVDGLSVSLENVIGNLLTCTIPITGGAQRTISL
GAGDRQVIQTPINDSLPVSSCSVALLFRQLGITNVLFLFCAALTEHKILFLSSSYQRLTD
ACRALLALMFPLKYSFTYVPILPAQLLEVLSTPTPFIIGVHSIFQSETQELLDVVIADLD
GGTVNVPECVHISLLPEPLLQQTREALSMVLDPELEVADLAFPPSTISASSLKFQDKEIR
AVFLRLFAQLLQGYRWCLHIIRIHPEPVIRFHKAAFLGQRGLTEDDFLTKVLEGMAFAGF
VTERGAPYRPIDLFDELVAYEVKRMKAEEGNKQKILRHIKELAEKLYKNENPYPAVTMHK
VQKPTEGCHLRLHQKPFPRLDEGTVQWIIDQATAKLQTAPPAVRAEKKCMVPSGPPIAAI
LERNGNALANSARRLEVVRNCISYVFENKMLEAKKLFPAVLRAMKGRAARHCLTQELHLH
VQQNRAVLDHQQFDFVIRMMNCCLQDCTAMDEHGIAAALLPLVTAFCRKLSPGITQFAYS
CVQEHVVWTNIQFWEAMFYCDVQNHIRALYLDSAEENHMEQESAEEPQEAKSALEIASEQ
LRLWPTMSREKQQELIQKEESTVFSQAIHYANRMSYLLLPLDTSKNRLLRSSGLGDVESV
SNSFVTNSIAGSVAESYDTESGFEDAESSDVANSVVRFINRFVDKVCTESGVTNEHLKGL
HVMIPDIVQMHIETLDAVHRESKRLPPIQKPKLLRPNLLLGEECVMEGLRVYLMPDGREE
GAGGSVGGPPLLPAEGAVFLTTYRIIFKGTPTDPLGRAASVQPVPMVLLGGSKLCPDPWE
GLPPDLAPLSPPRVPPQLLKIAFDEEVASDSAEIFRKHLHKLRYPQHVRGTFAFTVGQSP
KQAMQPKAKEKNPSLRTLSKNLVKNAKRTIGRQYVTRKKYTPPAWEQRGSQHFPEDNEDE
ISVSEELDRSTLTPSSTMRPSEKMTMTHVVERACCRDYQRLGLGTLSSSLTRSKNEPFRI
STVNRMYAICRSYPGLLIVPQSIQDNTIQRISRCYRQSRFPVVCWRNSRTKAVLLRSGGL
HGKGVVGLFKSQNAPTPGPSQADSTSLEQEKYLQAVINSMPHYSDAGGRNTLSGFTSAHM
SSADFSDKRQQPKLGSLMKQVMGGKDEGPGTLSRGGLGHRARVITLSSPKCASPKGRETP
RGTDAPAPPGVAVAQASPALAVPPQGVKPDPLQHWEVVPIEVFDVRQVKASFKKLMKACV
PGCPSSDPSVAYLRSLEESEWLSQIHKILQISVLVVELLDTGSSVLVSLEDGWDITTQVV
SLVQLLSDPYYRTLEGFRLLVEKEWLSFGHRFSHRGAQTLAGQSSGFAPIFLQFLDCVHQ
IHLQFPMEFEFSQYYLKFLSYHYISNRFRTFLLDSDYERIELGLLYEEKGERKGQQVSKS
IWDYIDRLNKKAPIFFNYLYAPEDGEVLRPYSNISNLKVWDYYTEETLSEGPPYDWELAQ
GQPEPAEEPDRQDTAAPQSKRRIIWPCYDNRSRVEPDAISKLLEELHNLEMELGQVPERW
KDTWDKVKASQRTEGRQEGSRTPSSLLMSSGLSHHRRSLGVYLQESGVGSTLNLSLDSDT
SSTSTPSSGKPGGRRSTSTLYSQFQMSESENRSYEGSLYKKGAFMKPWKSRWFVLDKTKH
QLRYYDSRMDTECKGVIDLAEVESITPGTPTMGAPKTVDEKAFFDLKTTKRVYNFCAQDV
QLAQQWIDRIQSCLSDA
NT seq 5634 nt   +upstreamnt  +downstreamnt
atggcccgcctggctgactacttcgtgctcgtgggatacgaccccggcaagcgcgggagc
ggggatggacagggacagatcctgcagcgcttcccggagaaggactgggaggacaacccc
ttcccacagggcatcgagctgttctgccagcccagcgggtggcagctcttccccgagagg
aacccccccaccttcttcgtggccgtgctgaccgacatcaactcagagcggcactactgc
gcctgcttcaccttctgggaggccgtggagagcccgcagccccagagccaggccaggaac
ggcgagggcgaggaggaggaggaggaggcctcgtcgcccgcgcagcctgcgcagctgttc
gctcccaagagcctggtgctggtgtcgcggctggaccacgccgaggtgttccggaacagc
ctggggctgatctacaccatctacgtggacgggctgagcgtgtccctggagaacgtcatc
gggaacctgctgacctgcaccatccccatcacggggggagcgcagaggaccatctcgctg
ggagcaggggacaggcaggtgatccagacccccatcaacgactcgctgcccgtcagcagc
tgcagcgtggccctgctcttccgccagctgggcatcaccaacgtgctgttcctgttctgc
gcggcgctgaccgagcacaagatcctgttcctctccagcagctaccagaggctgacagac
gcctgccgggccctcctggctctcatgttccccctcaagtacagtttcacctacgtgccc
atcctgcccgcccagctcctggaggtgctgagcacccccacccccttcatcatcggcgtc
cactccatcttccagtcggagacccaggagctgctggacgtggtgatcgcggacctggac
ggcggcaccgtgaacgtgccggagtgcgtgcacatctcgctgctccccgagcccctgctg
cagcagacgcgggaagccctgtccatggtcctggacccagagctggaggtggccgacctc
gccttccccccttccaccatttccgcctcttccctcaagttccaggacaaggagatccgg
gccgtgttcctgcgcctgtttgctcagctgctgcagggctaccgctggtgcctgcacatc
atccgcatccaccccgagcccgtcatccgcttccacaaggcggcgttcctgggccagcgg
gggctcaccgaggacgatttcctgaccaaggtgctggaggggatggccttcgctggcttc
gtcaccgagcgcggggctccctaccgccccatcgacctcttcgacgagctcgtggcctac
gaggtgaagcgcatgaaggcagaggaggggaacaagcagaaaatcctgaggcacatcaag
gagctggcagagaaactctacaaaaatgagaacccgtaccccgcggtgaccatgcacaag
gtgcagaagcccacggagggctgtcacctgcgcctgcaccagaagcccttccctcgcctg
gacgagggcaccgtgcagtggatcatcgaccaggccacggccaagctgcagacggccccg
cccgccgtcagggccgagaagaagtgcatggtgccctcgggaccccccatcgctgccatc
ctggagcgcaacgggaacgccctggccaacagcgcccggcgcctggaggtggtcaggaac
tgcatctcctacgtcttcgagaacaagatgctggaggccaaaaagctgttcccggccgtg
ctgcgcgccatgaagggccgggcggcccggcactgcctgacccaggagctgcacctgcac
gtgcagcagaaccgcgccgtgctggaccaccagcagttcgacttcgtcatccgcatgatg
aactgctgcctgcaggactgcacggccatggacgagcacggcatcgccgccgccctgctg
ccgctggtcaccgccttctgcaggaaactgagccctggcatcacccagttcgcctacagc
tgcgtgcaggagcacgtggtgtggaccaacatccagttctgggaggccatgttctactgc
gacgtccagaaccacatccgggccctctacctggacagcgccgaggagaaccacatggag
caggagagcgcggaggagccgcaggaggccaagtcggcgctggagatcgcctcggagcag
ctgcggctgtggcccaccatgagccgggagaagcagcaggagctgatccagaaggaggag
agcacggtgttcagccaggccatccactacgccaacaggatgagctacctgctgctgccc
ctggacaccagcaagaaccgcctgctccgcagctccggcctgggcgacgtggagagcgtc
agcaacagcttcgtcaccaacagcatcgcgggcagcgtggccgagagctacgacaccgag
agcggcttcgaggacgccgagagctcggacgtggccaactccgtggtgaggttcatcaac
cgcttcgtggacaaggtgtgcaccgagagcggcgtcaccaacgagcacctcaaggggctg
cacgtcatgatcccggacatcgtgcagatgcacatcgagacgctggatgccgtgcacagg
gagagcaagaggctgcctcccatccagaagccaaagctgctgcggcccaacctgctgctg
ggggaggagtgtgtgatggaggggctccgcgtgtacctgatgccggacgggcgcgaggag
ggggccgggggcagcgtcgggggaccccccctgctccccgcagagggagccgtgttcctc
accacctacaggatcatcttcaagggaacccccaccgaccccctgggcagggcagcctca
gtccagcctgtgcccatggtgctcctgggtggatccaagctgtgccctgatccgtgggaa
gggctgccccctgacctggcccctctgtcacccccacgcgtgcccccccagctgctgaag
atcgcctttgacgaggaggtggcctcggacagcgccgagatcttccggaagcacctgcac
aagctgcgctacccccagcacgtgcgcggcaccttcgccttcaccgtgggccagtccccc
aagcaggccatgcagcccaaggccaaggagaagaacccctcgctcaggacgctgtccaag
aacctggtgaagaacgccaagaggacgatcggccggcagtacgtgacccgcaagaagtac
acgcccccggcctgggagcagcggggcagccagcacttccccgaggacaacgaggacgag
atctcagtgtccgaggagctggacaggagcaccctgacgcccagcagcaccatgaggccg
tcggagaagatgaccatgacgcacgtggtggagcgcgcctgctgccgggactaccagcgc
ctggggctgggcacgctgagcagcagcctgacccgctccaagaacgagcccttccgcatc
tccaccgtcaaccgcatgtacgccatctgccgcagctaccccgggctgctgatcgtgccg
cagagcatccaggacaacacgatccagcggatctcgcgctgctaccgccagagccgcttc
cccgtggtgtgctggaggaactcccgcaccaaggccgtgctcctgcgctccgggggcctg
cacggcaagggcgtcgtcggcctcttcaagtcccagaacgccccgaccccaggcccctcg
caggcggactccacgagcctggagcaggagaagtacctgcaggctgtcatcaattccatg
ccccactactcggacgccggcgggcgcaacaccctcagcggcttcacctcggcccacatg
agcagtgcagatttctccgacaagaggcagcagcctaagctgggatcgctcatgaagcag
gtgatgggagggaaggacgaagggcctgggactttgagccgcggagggctgggtcacaga
gccagggtcatcaccctgtccagccccaagtgcgcgtcgccgaagggccgcgagacaccc
cgaggtacggacgcgcccgcgccgcccggggtggcagtggctcaggccagcccagccctc
gctgtccctccgcagggcgtgaagccggacccactgcagcactgggaggtggtgcccatc
gaggtgttcgacgtgcgccaggtcaaggccagcttcaagaagctgatgaaggcctgcgtg
cccggctgcccctccagcgaccccagcgtggcctacctgcgctccctggaggagtcggag
tggctgtcccagatccacaagatcctgcagatctcggtgctggtggtggagctgctggac
acgggctcgtccgtgctggtcagcctggaggacggctgggacatcaccacgcaggtggtg
tccctggtgcagctcctgtccgacccctactaccgcacgctggagggcttccggctgctg
gtggagaaggagtggctgtccttcggccaccgcttcagccaccgcggcgcccagaccctg
gcggggcagagcagcggcttcgcccccatcttcctccagttcctggactgtgtgcaccag
atccacctgcagttccccatggagttcgagttcagccagtactacctgaagttcctcagc
taccactacatttccaaccgcttccggacattcctgctggactcggactacgagcgcatc
gagctggggctcctgtacgaggagaagggcgagcggaagggccagcaggtctccaaatcc
atctgggactacatcgaccgcctcaacaagaaggctcccatcttcttcaactacctgtac
gcacctgaggacggggaggtgctgaggccgtacagcaacatctccaacctgaaggtgtgg
gattactacacggaggagacgctgtccgagggtcccccgtacgactgggagctggcgcag
gggcagccggagccggccgaggagccggaccggcaggacacggcggccccgcagagcaag
cgccgcatcatctggccctgctacgacaaccgcagccgcgtggagcccgacgccatctcc
aaactgctcgaggagttgcacaacctggagatggagctggggcaggtcccggagcgctgg
aaggacacgtgggacaaggtgaaagcgtcccagcgcacggaggggcggcaggagggcagc
aggacccccagctccttgctgatgtcctcggggctgtcccaccaccggcgctcgctgggc
gtgtacctgcaggagagcggggtgggctccacgctcaacctcagcctggacagcgacacc
agcagcacctccaccccgtccagcgggaagccgggcgggcgccgcagcacctccaccctc
tacagccagttccagatgtccgagagcgagaacagatcctacgaggggtctctgtacaag
aaaggcgccttcatgaaaccctggaagtctcggtggttcgtgctggataaaaccaaacat
cagctgcggtactacgacagccggatggacacggagtgcaagggggtcatcgacctggcc
gaggtggagtccatcaccccggggacccccaccatgggggcgcccaagacggtggacgag
aaagctttcttcgacctgaagacgacgaaacgagtttacaatttctgcgcccaggacgtg
cagctggcccagcagtggatcgaccgcatccagagctgcctgtcggacgcgtga

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