Lonchura striata domestica (Bengalese finch): 110480160
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Entry
110480160 CDS
T05897
Symbol
PSD
Name
(RefSeq) PH and SEC7 domain-containing protein 1
KO
K12494
PH and SEC7 domain-containing protein
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110480160 (PSD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480160 (PSD)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
110480160 (PSD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
MGA_dom
Motif
Other DBs
NCBI-GeneID:
110480160
NCBI-ProteinID:
XP_031361100
LinkDB
All DBs
Position
6:complement(16353132..16387397)
Genome browser
AA seq
1100 aa
AA seq
DB search
MAQAGAPVRFHPEEGCTASPPPFAHRVNRRPWLAGGSPEAGRCSPPACLTPNLNAGRLHL
LRKGLAPDARRCPLGLYNSTGSLARGPAEAAPFGSGGCPGTGRLTAPCTPRWGRPSPAIA
SLGSRSPPAPEGHSSVVTFRFIEKASVRTLGCPTAPHLHWENGPHSLSRSLELGGDVGSL
QPQPLPQERLLQTLKLEASASDPLLAGGRTPGETRPCGKEFCALDTSCLCRSLTNGLPEE
FPSLARSPLKPEPRYQGSTGLYPRQSSAHAQRIAKAKWEFFYGSSETPKTGSSAPDSAPL
AELPQKSVSPLPAKSPGLVPEHSLSHVEVEIEVSPLSSQKPGSCETGIIRRTVKYSETDL
DTVPLRCYRETNIDDILAEKEEVDSAIESQKDSESNPSFVGTPGRRNSTPEEPPAPATSC
SKDGLQNRDVDEDDEVFEAMRKENRERIMHRDTQGMLKSPVPFLLGHSLSKDGMDSFSKH
FETIMESHRAKGTSYTSLDSIDILSSPARTHGTFFTFDLPTLTPEIQGKIRDSAKVIKEN
FAPLAHLEPDSGTSSATDAPWTEREEEQRKRRKGTQHSPCHSEDSFGTPLASNTSDRPQS
QLVSDSESDMGSVEQLALGSTDTLSNGHKADLEAAKRLAKRLYNLDGFKKADVARHLGKN
NEFSRMVAGEYLKFFVFTGMSLDQALRTFLKELALMGETQERERVLAHFSQRYYECNPNA
ISSEDGAHTLTCALMLLNTDLHGHNIGKRMSCSDFIGNLEGLNGGTDFPKELLKALYGSI
KNEKLQWAIDEEELRKSLSELADPNPKSIKRISSCSNPFLDFSQDASIATYKHGLLVRKI
HADPDCKKTPRGKRGWKPFHAILKGMILYLQKEEYKPGKALAEEELKNAISIHHSLATRA
SDYSKRPNVFYLRTADWRVFLFQAQNPEQMHSWITRINVVAAMFSAPPFPAAIGSQKKFS
RPLLPSSCTRLSQEEQVKNHETKFKTMSAELLEHRSSLPEKKVKGKEYEELKQKEEYLEF
EKSRYGTYAMLLRAKLKAGSEDLAAFESTLFDTAGGEDDGLKKSHSSPSLNAEPSSTNTK
VKRNVSERTGRQPPGHPQKS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagcaggggcacctgtccgcttccaccccgaggagggctgcactgcctctccc
ccgccctttgcccacagggtgaaccggaggccctggctggcggggggaagccccgaggcc
gggcggtgcagccccccagcctgcctcacccccaacctcaacgccggccgcctccacctg
ctgcgcaagggcctggcacccgatgcccgccgctgccccctcggcctctacaacagcacg
ggctccctggcccgcgggccggccgaggcagcgccctttggcagcggcggctgcccaggc
acggggcgactgaccgccccctgcaccccacggtggggccggcccagcccagccatcgcc
tctctgggcagccgcagtccgccggccccagagggacacagctccgtggtcaccttccgc
ttcattgagaaggccagtgtgcggacactgggctgcccgacagccccccatctccactgg
gagaatggcccccacagcctcagccgcagtctggagctcggtggggacgtgggatccctc
caaccccagcccctgccccaggagaggctcctgcagacgctgaagctggaggcctccgcg
tctgacccacttctggctgggggcaggactccaggggaaacacgtccctgtgggaaggag
ttctgtgcccttgacaccagctgcctctgccgatccctaaccaatgggctgccagaggag
ttccccagcctcgccaggagtcccctgaagccagagccccgatatcagggcagcaccggg
ctgtatccccggcagagctctgcccatgcccagcgcatcgccaaggccaagtgggaattc
ttctatggctcctcagaaaccccaaagacaggctcctctgcccctgactccgctcccctg
gctgaactcccccagaagtctgtctcccctctgccagccaagtcaccagggctggtacct
gagcacagcctgagccatgtggaggtggagatagaagtgtctcctttgagcagccagaag
ccaggctcctgtgaaactgggattataaggaggacagtgaagtactctgaaacagacctg
gacactgtgccactgaggtgctatcgtgaaaccaacatcgatgatatcctggccgagaag
gaggaggtggattcagcaattgagagccagaaggacagtgagagcaacccaagttttgtg
ggcacgccaggcaggaggaacagcacaccagaggagccacctgccccagctaccagctgc
tccaaggatgggctgcagaacagggatgtggacgaggatgatgaggtgtttgaggcgatg
aggaaggaaaatagggaaaggatcatgcaccgagacacacaaggtatgctcaagtctccg
gtgcccttccttctagggcacagcctctccaaggatggcatggactctttcagcaaacat
tttgagaccatcatggagtctcatcgagccaaaggcacatcttacaccagcctggattcc
attgacatcctttcttccccagcccgtacccatgggacctttttcacttttgacctccca
accctcaccccagaaatacagggaaaaatccgagacagcgccaaggtgatcaaggagaac
tttgctcctctggctcacttagagccagactctgggaccagttcggctacagatgccccc
tggacagagagggaggaggaacagaggaaacgaaggaagggtactcagcacagcccttgc
cactcagaggacagctttggcactcccttggcctccaacacaagcgaccgcccccagagc
cagctggtttcagactcagagtcggacatgggcagtgtggagcagctggccctgggcagc
acggacaccctttccaatggacacaaggctgacctggaggctgccaagcgtctggccaag
aggctctacaacctggatggctttaaaaaagctgatgtggctcgccacctggggaagaac
aacgagttcagcaggatggtggcaggggaatatctgaagttcttcgtgttcacagggatg
agtctggatcaggctctcaggacctttctaaaagagctggccttgatgggagagacgcaa
gagcgagagcgagtgctggctcatttttctcagcgctactacgagtgtaatcccaatgcc
atctcttcagaagatggagcccacaccctcacgtgcgccctgatgctgctaaacaccgat
ctgcatggacataacattgggaagagaatgtcctgctctgacttcattggcaacttggag
ggactcaatggaggcactgacttccccaaggagctgctcaaggcactgtatggctccatc
aagaatgagaagctgcagtgggccatagatgaagaggagctgagaaagtccctctcggag
ctggcagatcccaacccaaagtccatcaagcgcatcagcagctgcagtaacccctttctg
gacttttcccaggatgccagcattgccacttacaagcacgggctgttagtccgcaagatc
cacgctgatcctgactgcaagaaaacaccccgagggaagcgcggctggaagcccttccac
gccatcctgaagggaatgattctctacctgcagaaggaggagtataagccagggaaagca
ctggcagaagaggaactgaagaatgctattagcatccaccattcgcttgccacacgggca
tctgactacagcaagcgacccaacgtcttctacctcaggacagctgactggagggtcttc
cttttccaagcacagaaccccgaacagatgcactcatggatcacgcgcatcaacgtggtg
gcagccatgttctctgcaccccccttccccgcagccatcggctcccagaagaagttcagc
cgcccgctgctgcccagctcctgcaccaggctgtctcaggaggagcaggtgaagaaccat
gagaccaagttcaagacaatgtcagcggagctgctggagcatcgctcctcattgcctgag
aagaaggtgaaaggcaaggagtacgaggagctaaagcagaaggaagagtacctggaattt
gagaaatcccgctacggcacctatgccatgctgctgcgggccaagctgaaggctggctcc
gaggacctggcagcatttgagtccaccctgtttgacacagcgggtggggaggacgatggc
ctgaaaaagtcccactccagcccctcactcaacgcagagccctccagcacaaacaccaag
gtgaagcgcaacgtctcggagcgcaccggccgccagccccctggccacccccagaaatcc
taa
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