KEGG   Lactuca sativa (garden lettuce): 111878773
Entry
111878773         CDS       T05352                                 
Name
(RefSeq) oligoribonuclease isoform X1
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111878773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111878773
   03009 Ribosome biogenesis [BR:lsv03009]
    111878773
Messenger RNA biogenesis [BR:lsv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     111878773
Ribosome biogenesis [BR:lsv03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    111878773
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 111878773
NCBI-ProteinID: XP_023731047
LinkDB
Position
5:351010776..351013744
AA seq 255 aa
MSTLSNAFSLLELDVEDDREETTNATDNKKKANGNHDKETDSLQDATLIKNDKGTRQTLD
MLEGEYRLPLVWIDLEMTGLNIEVDRILEIACVITDGKLTKSVEGPDLVIHQTKECLEKM
GEWCQDHHAASGLTERVIQSSISEKEAEQQVVDFVKKHVGTYTPLLAGNSIYVDFLFLKK
YMPDLASLFSHVVVDVSSIKALCLRWFPRVFYWFTDNKKAPKKENRHRAMDDIKESIAEL
KFYKENVFKSSKSKK
NT seq 768 nt   +upstreamnt  +downstreamnt
atgagcacactctcaaatgccttttctctgctagaactggatgttgaggatgatagggaa
gagacaaccaatgctactgataataaaaagaaagccaatggtaaccatgataaagaaact
gatagtcttcaagatgcaaccctaattaagaatgataaaggcactcgtcaaaccctagac
atgttagaaggagaatataggttgcctcttgtgtggattgacttggaaatgacaggattg
aatattgaagtagatagaatactggagattgcttgtgtgatcacagatgggaagttgaca
aaatctgtagagggtcctgacttggttatacatcaaacaaaagagtgtcttgaaaagatg
ggtgaatggtgtcaagatcatcatgctgcaagtggtttgactgaaagggtgatccaaagt
tccatcagtgaaaaagaagctgaacagcaggttgtagattttgtcaagaaacatgtgggc
acatatactcctctgcttgcaggaaattcaatttatgtcgatttccttttcttgaagaag
tacatgcctgatttggctagtcttttctctcatgtagttgttgatgttagcagcattaag
gctttatgtctccgttggttcccaagagtattttattggttcacagataacaagaaagct
ccaaagaaggagaacaggcatagagccatggatgacataaaagaaagcatagcggagctg
aaattctacaaggaaaatgtattcaaatcatcaaagtctaagaagtaa

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