Lactuca sativa (garden lettuce): 111889612
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Entry
111889612 CDS
T05352
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
lsv03015
mRNA surveillance pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111889612
09122 Translation
03013 Nucleocytoplasmic transport
111889612
03015 mRNA surveillance pathway
111889612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111889612
03041 Spliceosome [BR:
lsv03041
]
111889612
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111889612
Spliceosome [BR:
lsv03041
]
Complex C
Other components
EJC/TREX
111889612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
111889612
NCBI-ProteinID:
XP_023741526
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All DBs
Position
1:complement(59279942..59281458)
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AA seq
201 aa
AA seq
DB search
MATAADVDALDFEPDDDDLMDEDAAVDVDASSPRASAPIPKLKSAITGGSVAVAPKKTKG
RGFREETDAERNNRMSGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEF
GEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIAAMDGGELLTQNVNVDWAFSKGPFR
RRNNRRRSPRGNRSRSPRRRF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgctgccgacgtagatgcgctggactttgagcccgatgacgatgatctcatg
gacgaagacgccgccgttgacgtcgatgcatcttctcctagggcttccgctcccatccct
aaactgaaatccgctatcactggcggctctgtcgccgttgctcctaagaaaactaaaggc
cgggggttccgcgaagaaaccgacgccgaacgtaacaaccgtatgtccggtcgtttcgat
tcgcttgattccgatggcggccctggtcctgaacgatcaattgaggggtggattattctg
gttactggagtacatgaagaagctcaagaagatgacttacaaaatgcatttggggagttt
ggtgagattaagaacttgcatctaaatcttgatcgcaggactggttttgtcaaggggtat
gcactgattgagtatgaaagctttgaggaagcagagaaagctatagctgcaatggatgga
ggtgagctgctgactcagaatgtgaatgttgattgggcattcagtaaaggtcctttcaga
aggagaaacaataggaggagatcacctcgtgggaatcggtcaagaagtccaaggaggaga
ttttga
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