KEGG   Lactuca sativa (garden lettuce): 111889612
Entry
111889612         CDS       T05352                                 
Name
(RefSeq) RNA-binding protein Y14A
  KO
K12876  RNA-binding protein 8A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03013  Nucleocytoplasmic transport
lsv03015  mRNA surveillance pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111889612
  09122 Translation
   03013 Nucleocytoplasmic transport
    111889612
   03015 mRNA surveillance pathway
    111889612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111889612
   03041 Spliceosome [BR:lsv03041]
    111889612
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111889612
Spliceosome [BR:lsv03041]
 Complex C
  Other components
   EJC/TREX
    111889612
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 111889612
NCBI-ProteinID: XP_023741526
LinkDB
Position
1:complement(59279942..59281458)
AA seq 201 aa
MATAADVDALDFEPDDDDLMDEDAAVDVDASSPRASAPIPKLKSAITGGSVAVAPKKTKG
RGFREETDAERNNRMSGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEF
GEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAIAAMDGGELLTQNVNVDWAFSKGPFR
RRNNRRRSPRGNRSRSPRRRF
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcgaccgctgccgacgtagatgcgctggactttgagcccgatgacgatgatctcatg
gacgaagacgccgccgttgacgtcgatgcatcttctcctagggcttccgctcccatccct
aaactgaaatccgctatcactggcggctctgtcgccgttgctcctaagaaaactaaaggc
cgggggttccgcgaagaaaccgacgccgaacgtaacaaccgtatgtccggtcgtttcgat
tcgcttgattccgatggcggccctggtcctgaacgatcaattgaggggtggattattctg
gttactggagtacatgaagaagctcaagaagatgacttacaaaatgcatttggggagttt
ggtgagattaagaacttgcatctaaatcttgatcgcaggactggttttgtcaaggggtat
gcactgattgagtatgaaagctttgaggaagcagagaaagctatagctgcaatggatgga
ggtgagctgctgactcagaatgtgaatgttgattgggcattcagtaaaggtcctttcaga
aggagaaacaataggaggagatcacctcgtgggaatcggtcaagaagtccaaggaggaga
ttttga

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