Lactuca sativa (garden lettuce): 111900022
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Entry
111900022 CDS
T05352
Name
(RefSeq) tyrosine--tRNA ligase, chloroplastic/mitochondrial
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111900022
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsv01007
]
111900022
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111900022
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111900022
Enzymes [BR:
lsv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
111900022
Amino acid related enzymes [BR:
lsv01007
]
Aminoacyl-tRNA synthetase
Class I (A)
111900022
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111900022
Prokaryotic type
111900022
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
111900022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
TyrRSs_C
Motif
Other DBs
NCBI-GeneID:
111900022
NCBI-ProteinID:
XP_023751673
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All DBs
Position
6:complement(21464023..21466230)
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AA seq
497 aa
AA seq
DB search
MAAAAASMLKTTFFILKPTYKIPISSSLFQSPFIRSIPNKRTLHYNNRRHYQLTRKFCSS
QLTQEQSHTSRSNVIEILEERGLLEAITGDNLRSICTDSSLRVYCGFDPTAESLHLGNLI
GIIVLSWFLRCGHSAVALVGGATGRVGDPSGKSLERPELDIASLERNIAGISDIILKVLG
HISTDNNSIKVLNNYDWWKDVKLLDFLKDVGRFARVNTMMAKESVKRRLEASDQGLSYTE
FTYQLLQGYDFVHLFKTENITVQIGGSDQWGNITAGTELIRKLHQSDSAYGLTFPLLLKS
DGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSIPDSDVVRFLKILTFLSLDEIKEIEIEMK
STGYLQNSAQKRLAEEVTRFVHGEDGLQEAIKATEALKPGSETRLDWKTIEGIAEDVPCC
SLSYDEVLDLGVVDLSVSTGLIESKSAARRLLKQGGLYLNNGRVDNEGKKISVDDIVDGK
VLLLSAGKKNKMVVRIA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggctgcctccatgctgaaaacaaccttcttcatccttaaacccacatac
aaaattccaatctcctcctctctgtttcaatcgcctttcatccgatcgatacccaacaaa
cgaaccctacactacaacaaccgacggcattaccaattgacccgcaaattctgctcttca
caattaacccaagagcaatcccacaccagtcgctccaacgtcatcgaaatacttgaagaa
agaggcctacttgaagccatcaccggcgataacctccgttcaatttgcacagattcatct
cttcgggtctactgcggcttcgaccctaccgccgaaagcctccaccttggtaacctcatc
ggaatcatcgtcttgtcatggttcctccgatgcggccactccgccgtcgccctcgttgga
ggcgccaccggtcgggtcggtgatccatccggtaagtccctcgaacgccctgaactcgat
atcgcatccctagaacgaaacatcgcgggtatctccgatataatcctgaaagtcctcggg
catatatcaaccgataacaattcaatcaaggttttgaacaattacgattggtggaaagac
gtgaaattgctcgatttcttgaaagacgtcgggagattcgctagggttaacacaatgatg
gctaaagaaagtgtgaaaagaagattagaagcctccgatcaaggtctaagctacaccgaa
ttcacttaccagctcttacaaggctacgacttcgttcacttgttcaaaaccgaaaacatc
acagttcaaatcggcggatcagatcaatggggaaacatcactgctggaactgaactaatt
cgaaagcttcatcaatccgattctgcttatggtctcacattccctctgttactaaaatcc
gacggcacaaaattcgggaaatcagaagacggggcaatctggctttcaccatcgatgcta
tcaccttacaaattctaccagtattttttctcaattcctgattccgatgttgtgagattc
ttaaagattcttacgtttttgagcttggatgagatcaaggagattgaaatcgagatgaaa
tcaaccgggtatttgcagaattctgcacagaaaaggttggctgaagaggtgacgagattt
gttcatggggaagatggattacaggaggcgattaaggctactgaggctttgaaaccaggg
tctgagacccgattggattggaagacgattgaggggattgctgaagatgttccttgttgt
tctttgagttatgatgaggttttggatcttggtgttgttgatttatcagtttctactgga
ttgattgagagtaaatcggctgcaaggaggctgttgaagcaaggtggattgtatttgaat
aacgggagagttgataacgaaggaaagaagattagtgttgatgatattgtggatgggaaa
gttctgttgttgtctgctggaaagaagaacaagatggttgtaagaattgcatga
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