Lactuca sativa (garden lettuce): 111904768
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Entry
111904768 CDS
T05352
Name
(RefSeq) leucine-rich repeat receptor protein kinase HPCA1 isoform X3
Organism
lsv
Lactuca sativa (garden lettuce)
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRR_4
LRR_8
LRRNT_2
Pkinase_fungal
DUF6479
DUF485
Motif
Other DBs
NCBI-GeneID:
111904768
NCBI-ProteinID:
XP_023756259
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Position
9:complement(147872610..147880842)
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AA seq
954 aa
AA seq
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MSVRIGVLFVLLFIFIHVLLTSAQNRDIVYLQALMDNLHNTPPNWVGSDPCVEKWDGISC
IESRVTSITLSSIGLSGELSGDIGQLSELQTLDLSYNKDLTGSLTPDIGSLKKLSNLILV
GCGFNGPLPETLGSLTQLGYLALNSNGFTGPIPPSIGKLSKLYWLDLADNKLSGPIPVSK
GPTPGLDQLVNIKHFHFGKNKLSGEIPPRLFSSKMSLKHVLFEENQLTGTVPLTLGLVQN
LEVLRLDRNLFSGEVPSNINNLTSLNQLYLSNNNFEGPLPNLTGMKILNYLDMSNNSFQP
SEIPPWLSSLQSLTTLMMQDTGLIGEVPVDLFSIPQIETVVLRNNQLNGTLDFGDSYSNH
LHFIDMTNNLISGYTERSRYSADLILISNPICRESDTTASYCDLPIDSNSSYSTPQNNCN
PETTCTSDQVSSPNCKCSYPYTGTLTFRAPSFSNLGNSTIYTSLQSSMMVSFQSNHLPVD
SLSLSQPTKNSDKYLEINLAVFPSGGERFNRSGISQIGFILSNQTYKPPHSFGPYFFLGH
NYDFFADATKRKGKSIGIGVTIGVVVGGCVLVLLLIIAGIYAFREKGRAERATKKNSPFA
SWDPDKGGGDCPQLKGARSFTYEELKTCTNNFAITANIGSGGYGMVYRGTLRNGQLVAVK
RAQLRSTQGGLEFKTEIELLSRVHHKNVVGLVGFCFDEGEQMLVYEFIVNGTLKDSLSGR
SGIRLDWMRRLKIILGAARGLQYLHDLADPPIIHRDVKTTNILLDERLNAKVADFGLSKP
LGDADRTHVTTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGIVMLELITARNPIEKGKYIV
REVKEAMDREKDLYNLREVLDPIIGLTHELQGLERFVDIALRCVEDTGNQRPRMNEVVKE
IESIMELAGFNPNAESASASESYEGKSKGSGHPYLNESLFSYSGGLLDSNLEAK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaagaattggggtattgtttgtgctactattcatattcatacatgtattgctt
acatcagcccagaatcgagatattgtatatctacaagctctcatggataacttgcataac
actccaccaaattgggttggatccgacccatgtgtggaaaaatgggatgggatctcctgc
attgagtcacgtgtgacatcaataaccctatcaagcattggattaagtggtgagttatct
ggagatattggacaattatccgaattgcaaacactggatctgtcttacaataaggatctc
acaggatctcttactccagatatcgggagtttaaaaaagttatcaaatttaatcctggtt
ggttgcggtttcaatggtccacttccagaaacacttggatctttaacccaactaggctac
ttggctttgaattcaaatggattcactggaccaattccaccatcaatagggaaactttct
aaactttattggttggatttagctgataacaagcttagtgggcccataccagtgtctaaa
ggacccacacctggccttgaccaattggtcaacataaaacactttcactttggaaagaac
aaactctcaggtgaaataccacctcgcctcttcagctccaagatgtctcttaaacacgtg
ttatttgaagaaaatcagttaacaggaacagttccattgacactaggacttgttcagaat
cttgaggtcttacgattagacaggaatttgttcagtggtgaagtcccttcaaacatcaac
aatcttacatcactcaaccagttgtatctttccaacaacaactttgaaggcccattgccc
aatctcactggaatgaaaatccttaactatttggatatgagcaataattcttttcaacca
tcagagattcctccatggctttcatcattgcaatctctaacaacattgatgatgcaagat
acagggcttataggagaagtacctgttgacttatttagcattccacaaatcgagactgtg
gtactaagaaacaaccagcttaatggaacccttgattttggagattcttatagcaaccat
ttacatttcattgatatgacaaataacttaatttctggatacacagaaagaagccgatac
tctgctgatctcatactcatcagcaatccaatttgtagggaatcagacacaacagcatca
tattgtgatcttcccatagattccaactcatcatattcaacaccacaaaacaattgtaat
cctgaaactacttgcacttcagatcaagtttcaagtccaaattgtaaatgttcatatcca
tacacaggaactttgacttttagggctccttctttctccaaccttggaaactcaactatc
tatacatcccttcagagttccatgatggtttcttttcaatccaaccacctcccggttgac
tcactttcactgagtcaacccaccaagaactcagacaagtaccttgaaataaacctagcc
gttttcccatctggtggtgaacgattcaataggtcagggatttctcaaatagggtttata
cttagcaatcaaacttataaacctccacactcttttggaccctatttttttctaggccac
aactatgatttctttgcagacgcaacaaaaagaaaaggaaaatcaattggaattggagtt
actattggagtagtagtgggtggttgtgttctcgtgctattacttatcattgcaggaatt
tatgcttttcgtgagaaaggaagagcggaaagagctacaaagaagaactctccttttgct
tcgtgggacccagataaagggggaggtgattgtcctcagctaaaaggggcaagatctttc
acatatgaagagcttaaaacttgcacaaataattttgcaatcactgccaacataggctct
ggtggctatgggatggtgtacagagggacacttcgaaatgggcaattggttgctgttaaa
agagctcaactaaggtcaacacaaggtggacttgagttcaaaactgagattgagcttctt
tcaagagttcatcacaagaatgttgttgggcttgttggtttctgttttgatgaaggtgaa
cagatgcttgtatatgagtttattgtcaatggtacactcaaggatagcctttcagggaga
tctgggataagattggattggatgagaagactgaaaataatccttggagctgcaagaggt
ttgcagtatcttcatgatcttgctgatcctccaatcatacacagagatgtgaagacaaca
aatatcttacttgatgaacgcctcaatgccaaagttgctgattttggtctttcaaaacca
ttaggtgatgctgatcgcacacatgtcaccactcaagtcaaagggacaatgggctacatg
gatcccgaatactacatgactcaacaattaaccgaaaaaagcgatgtttacagcttcgga
atcgtgatgttagagctaataaccgcaagaaatccaatagaaaaaggtaagtatattgtg
agagaagtaaaagaagccatggacagggaaaaagacctttataacctccgtgaggtactt
gacccgatcatcggtttgacccatgagctacaagggttggaaagatttgtggatatcgcg
ttgaggtgtgtggaagataccggaaatcaaaggccaagaatgaatgaagttgtgaaagag
attgagagtattatggaactcgcgggttttaatccgaatgctgagtcagcatcggcttcc
gaaagttatgaagggaaaagtaaggggagtgggcatccttatttgaatgaaagccttttt
tcgtatagtggaggtcttttggattcaaatttggaggctaaataa
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