Lactuca sativa (garden lettuce): 111905574
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Entry
111905574 CDS
T05352
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03030
DNA replication
lsv03410
Base excision repair
lsv03420
Nucleotide excision repair
lsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111905574
03410 Base excision repair
111905574
03420 Nucleotide excision repair
111905574
03430 Mismatch repair
111905574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111905574
03036 Chromosome and associated proteins [BR:
lsv03036
]
111905574
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111905574
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111905574
DNA Replication Termination Factors
ELG1-RFC complex
111905574
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111905574
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111905574
Check point factors
HRAD17(Rad24)-RFC complex
111905574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
RuvB_N
AAA_11
AAA_16
Mg_chelatase
AAA_5
AAA_14
AAA_assoc_2
ResIII
SLFN-g3_helicase
nSTAND3
AAA_24
DNA_pol3_delta
PhoH
AAA_2
AAA_18
AAA_28
AAA_7
AAA_19
AAA_30
bpMoxR
RNA_helicase
Parvo_NS1
AAA_25
DUF815
TIP49
ATPase_2
IstB_IS21
DUF3853
TIP49_C
AAA_17
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111905574
NCBI-ProteinID:
XP_023757035
LinkDB
All DBs
Position
9:complement(104964070..104966726)
Genome browser
AA seq
341 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDERGINVVRTKIKNFAAVAVGSGHQGGYGYPCPPFKII
ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIM
STRVLHICNEEGLNLDSEALSTLSSISQGDLRRAITFLQGAARLFGSSISSKDLISVSGV
VPQEVVGDLLASCKSGSFDSANKQVNNVIAEGYPVSQILSQLFDLVVESDDVSDEQKARI
CRKLGESDKCLVDGADEYLQLLDACSCMIKAFCNMPEGYSN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgctgcagagctctcaaccttgggtcgagaaataccgacccagacgagtt
aaggatgttgcccaccaagacgaagttgtccgagtcctcaccaacacgctcgagaccacc
aattgtccacacatgctcttttatggcccacctggaaccggcaaaaccaccactgctctc
gccattgctcaccagctctacggtcctgaactatacaaatctagggttcttgagctgaat
gctagcgatgagcgtggaatcaatgtagttcgaactaaaatcaagaatttcgctgcagtt
gctgttggttctggacatcaagggggctatggttatccttgtccacctttcaagatcatc
atccttgatgaagctgattccatgactgaagatgctcagaatgccttacgtcgaactatg
gaaacctattcaaaagtaacaagattctttttcatatgcaattacatcagcaggatcata
gaacctcttgcttctagatgtgctaagtttaggtttaagccactttcagaagaaatcatg
agcactcgtgtgctacatatatgcaatgaggaagggcttaacttggactctgaggctctc
tcaaccttaagttccatatctcaaggagatcttcgtagagctatcacctttttacaggga
gctgctcgtttattcggatcctcaatttcttccaaggacttgattagtgtttcaggggtt
gtccctcaggaagttgttggggatcttcttgcatcttgtaaaagtggttcatttgactct
gcaaacaaacaagtgaataatgttattgcagaggggtatccagtcagccagattctctcc
cagttgtttgatttggtggttgaatctgatgatgtgtctgatgaacaaaaagcaagaata
tgtaggaaacttggtgaatccgataagtgccttgttgatggagcagatgagtatttgcag
ctgttggatgcatgcagttgtatgatcaaagcattttgtaacatgccagaaggatattct
aattag
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