Leptotrichia shahii: JCM16776_1629
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Entry
JCM16776_1629 CDS
T06589
Name
(GenBank) phosphoesterase RecJ domain-containing protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lsz
Leptotrichia shahii
Pathway
lsz00920
Sulfur metabolism
lsz01100
Metabolic pathways
lsz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lsz00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
JCM16776_1629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsz03400
]
JCM16776_1629
Enzymes [BR:
lsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
JCM16776_1629
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
JCM16776_1629
DNA repair and recombination proteins [BR:
lsz03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
JCM16776_1629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBM41402
UniProt:
A0A510JPV8
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All DBs
Position
complement(1752738..1753754)
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AA seq
338 aa
AA seq
DB search
MSKNYKGNITPKEIENEIKTAKSIILTVHVNPDGDALGSVLAFYFMINEYCKKNNIEKDI
KIIVDDKLPKYMRYFEDAKLIWNYEKFYDEFNKNFQNDEKFDLFISLDCANEERYGRAVE
IKKLSEKSINIDHHISNTEHADFNYVEDICSTGELLYQFLEIFGIELTKKIAEYMYLGII
NDTGNFRHDNVTEKTFLVCSKLIGAGVNNHEIANIIFQVSEKKVELIGEVYKNKKINEKY
KFVSYYLTQEKMKELGIEKDDTDGTAEMLLRIEGMEISLFVRENIDGSLKGSFRTNDKYD
VNKIASIFGGGGHIKAAGFKTDLSFEEILKKTYRELEK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaattataaaggaaatattacaccaaaagaaatcgaaaatgaaataaaaaca
gctaaaagcatcattttgacagtacacgttaatcctgatggagatgcacttggttcagtt
ttagcattttattttatgataaacgagtattgtaaaaaaaataatattgaaaaagatata
aaaatcattgttgatgacaaattgcctaaatatatgcgatattttgaagacgcaaagtta
atttggaactatgaaaaattttatgatgaatttaataaaaattttcaaaatgatgaaaaa
tttgatttgttcataagtttggattgtgcaaatgaggaaagatatggaagagctgtggaa
ataaaaaaattaagtgagaagtcgataaatattgatcatcatataagtaatactgaacat
gctgattttaactatgtggaagatatttgcagcacaggtgagcttttgtatcaattttta
gaaatttttggtattgaattgacaaaaaaaattgctgagtatatgtatcttggaataatt
aatgatactggaaactttagacatgataatgttacagaaaaaacttttcttgtttgttca
aaattaattggagcaggtgtaaataatcatgaaattgccaatattatttttcaagttagt
gaaaaaaaagttgaattaattggtgaagtttataaaaataaaaaaattaacgaaaaatat
aagtttgtcagttattatttgacacaggaaaaaatgaaggaactgggaattgaaaaagat
gatacagatggtacggcggaaatgctgttaagaatagaaggaatggaaatctctcttttt
gtaagagaaaatattgatggctctctaaagggaagttttcgtactaatgataaatatgat
gtaaataagatagcttcaatttttggtggtggaggacatataaaagctgctggatttaaa
acagatttatcttttgaggaaattttgaaaaagacatatagggaattagaaaaataa
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