KEGG   Leucobacter tenebrionis: KVY00_14655
Entry
KVY00_14655       CDS       T09454                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ltn  Leucobacter tenebrionis
Pathway
ltn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ltn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    KVY00_14655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ltn03400]
    KVY00_14655
Enzymes [BR:ltn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     KVY00_14655
DNA repair and recombination proteins [BR:ltn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     KVY00_14655
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase DNA_primase_S
Other DBs
NCBI-ProteinID: QZY51776
LinkDB
Position
complement(3200950..3203496)
AA seq 848 aa
MARTAHRDRKQQTVEVGGHRIRVSNLDKVLYPSTGTTKGDVIGYYGAIAPTMLPHCRDRP
ATRKRWPDGVGDDGRGEVFFQKDIGDSAPDWVRTGRIQHKDHVNHYPLVNDEATLVWLAQ
LAALEIHVPQWRFDAEGEARNPDRLVFDLDPGDGVTLRECARVAFLVRDILRGMGLPSIP
VTSGSKGIHLYAALDGTQTSDQASAVARELARSLEADHPDDITSSMKRALRPGRVFIDWS
QNNAAKTTVTPYSLRGRIAPTVAAPRTWRELASPHLRQLEFHEVLERVARRGDPLAELAE
LSDAHAVSDRLAVYRAKRDAARTPEPVPAASGAKGSKGSGGAKVSKDSKGSTGRADTDDP
DSEGSRRAEPVFVIQRHEARRLHFDFRLEHDGVLVSWALPKGVPTDPKVNHLAVPTEDHP
MSYRHFEGVIPKGEYGAGNVEIWDSGTYELEKWRDDEVIVRLTGRPGGGLGGPRRYALFR
AGEAGGKPRWMIHLMSDEPAAQGRGKKRNPDPAPDPDPPSAIPPRAPAMRPMLSERGAPA
EFDRLDEREWAFEMKWDGIRALAFVDGERCTLRSRSDGDLTASYPEFAELPAVVNGEEAV
LDGEIIALGPDGAPSFGRLQRRFGLTNRADVARARREAPASYLVFDVLSINGRDCRALPY
RQRRELIEALVEEDADVPVALPDVFAGEARDAAETSRGLHLEGVMAKRWTSPYRSGVRSG
DWLKFPLINTEEAVVIGWRESTADARGLASLLLADWRDGAWRYAGRVGTGFSARDRRAIR
DRLAPLECDEPAAEVPREVRRDAHWVRPELVAEVESKARTATGSFRQAVWRGWRPDKRPE
DLAAGSGE
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggcccgcacagcacacagggatcgcaagcagcagacggtcgaggtgggcggtcaccgg
atccgcgtctcgaacctcgacaaggtgctctacccctctaccggaaccaccaagggagac
gtgatcggctactacggcgcgatcgcgccgacgatgctgccgcactgccgcgaccggccg
gcgacgcgcaagcgctggcccgacggcgtgggcgacgacggtcgcggcgaggtgttcttc
cagaaggacatcggcgattccgcccccgattgggtgcgcacgggccgcatccagcacaag
gatcacgtcaatcactacccgctcgtgaacgacgaggcgacgctcgtctggctcgcgcag
ctcgccgcgctcgagatccatgtgccgcagtggcgcttcgatgcggagggcgaggcccgg
aatccggatcgcctcgtgttcgacctcgacccgggtgacggtgtgacgctgcgcgagtgc
gcgcgggtcgcgttcctggtgcgcgacatcctgcgcggcatgggcctcccctcgatcccg
gtgacgagcggcagcaagggcatccacctctacgccgcgctcgacggcacccagacctcc
gaccaggcgtcggccgtggcgcgcgaactggcccgctcgctcgaggccgaccaccccgac
gacatcacgagctcgatgaagcgagcgctgcgcccgggccgcgtgttcatcgactggagc
cagaacaatgcggcgaagaccaccgtcacaccgtactcgctgaggggcaggatcgcgccc
accgtcgccgccccgcgcacctggcgggagctcgcgtcgccccacctgcggcagctcgag
ttccacgaggtgctcgaacgggtcgcgaggcggggcgatccgcttgcggagctggcggag
ttatcggacgcgcacgcggtgtcggatcgcctggccgtgtaccgggcgaagcgcgacgcg
gcgcgcaccccggaaccagtgcccgcggcgagcggcgcgaagggctcgaagggctcgggc
ggcgcgaaagtctcgaaggactcgaagggttcgaccggcagggccgacaccgacgatccc
gattcggagggctcccgacgggccgagcccgtcttcgtgatccagcgccacgaggcgcgc
cggctgcacttcgacttccgcctcgagcacgacggtgtgctcgtcagttgggcgctgccg
aagggtgtgccgaccgacccgaaggtgaaccacctcgcggtgcccacggaggaccacccg
atgtcgtaccggcacttcgagggggtcatcccgaagggcgagtacggggcaggcaacgtc
gagatctgggactccggcacctacgagctcgagaagtggcgtgacgacgaggtgatcgtg
cggctcaccggtcgtccgggcggcggcctcggcgggccgcggcgctacgcgctgttccgc
gcgggcgaggccggcgggaagccgcggtggatgatccacctcatgagcgacgagcccgcg
gcacagggccggggcaagaagcggaatccggatcccgcaccggaccccgatcccccgtcc
gcgatcccgccccgggcccccgccatgcgtcccatgctttccgagcgcggcgcccccgcc
gagttcgaccgcctcgacgagcgcgagtgggcgttcgagatgaagtgggacggcatccgc
gcgctcgccttcgtcgacggcgagcgctgcacactgcgcagccgctccgacggagacctc
accgcgtcgtaccccgagttcgcggagctgcccgcggtggtgaacggtgaggaggcggtg
ctcgacggcgagatcatcgcgctcggacccgacggcgcgccgagcttcggccggctgcag
cgccgcttcgggctgacgaatcgcgccgacgtggcgcgggcgcgccgggaagccccggcc
tcctacctcgtgttcgacgtgctgagcatcaatggccgggactgccgcgcgctcccctac
cggcagcgccgcgagctgatcgaggcgctcgtcgaggaggacgccgacgtgccggtcgcc
ctgcccgacgtcttcgccggggaggcgcgcgatgcggcggagacgagccgtggcctgcac
ctcgagggtgtcatggcgaagcgctggacgagcccctaccgctcgggggtgcgctcaggg
gactggctcaagttcccgctcatcaacaccgaggaggccgtggtgatcggctggcgcgag
agcaccgccgacgcccgcggtctcgcgtcgctgctgctcgcggactggcgggacggcgcc
tggcgatacgcgggccgggtgggcaccgggttctcggcgagggatcggcgcgcgatccgc
gaccgcctcgcgccgctcgagtgcgacgaacccgcagccgaggtgccccgcgaggtgcga
cgcgacgctcactgggtgcggccggagctcgtggccgaggtcgagtcgaaggcgcgcacc
gcgaccggcagcttccgtcaggccgtgtggcggggatggcggcccgacaagcgccccgag
gatctcgccgcgggctccggcgaatga

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