Lipotes vexillifer (Yangtze River dolphin): 103087627
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Entry
103087627 CDS
T03090
Symbol
DHX36
Name
(RefSeq) probable ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103087627 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103087627 (DHX36)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103087627 (DHX36)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103087627 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
PhoH
nSTAND3
AAA_14
ATPase
AAA_34
RsgA_GTPase
DUF6782
Motif
Other DBs
NCBI-GeneID:
103087627
NCBI-ProteinID:
XP_007472049
UniProt:
A0A340YIX5
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MSYDYHQNWGRDGGGRDGGSRSSGGGYGGSYGGGHGGNRGSGGGGGGGGGGGGRGGRGRH
PGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSDSQ
ISWFAPEDHGYGTEAPAENKPNSVKKVEDQEKKLINQEKRPFRIRDKYIDRDSEYLLQEN
EPDVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGC
GKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQI
RLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLL
NYRPDLKIVLMSATLNAEKFSEYFGNCPVIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEH
RSQFKRGFMQGHVNRQEKEEKEAIYKERWPGYVRELRKRYSPSTIDVIGMMDDDKVDLNL
IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQT
QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA
NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF
LSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCC
LDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARQRGF
RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAV
ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRT
SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELD
ILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLLKTQEKATPRNLPPRFQDGYYS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggcgggggccgcgatggcggctcc
cgcagctccggcgggggttacggaggaagctatggagggggccacggagggaatcgaggc
tccggaggtggcggcggcggcggcggaggagggggtggtcgaggcggccgaggccgacat
cccgggcacctgaaaggccgcgaaatcggcttgtggtacgcgaagaaacaaggccagaag
aacaaggaagcggagaggcaggagagagctgtggtacatatggatgaacgtcgagaagaa
caaattgtgcagctgctacattctgtgcaagctaagaatgataaagattcggactcacaa
atatcttggtttgctcctgaagatcacggatatgggactgaagctcctgctgagaacaaa
ccaaactcagtaaagaaagttgaggatcaggaaaaaaaattgataaatcaagaaaagagg
ccatttagaatcagggacaaatatattgaccgcgattctgaatatctcttgcaagaaaat
gaaccagatgtaactttagaccaacaattattggaagatttacaaaagaaaaaaactgac
cttcggtatattgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaag
gaattggtaaatatgatcgataaccatcaggtaacagtagtaagtggtgaaactggctgt
ggaaaaaccactcaagttactcagttcattttggataactacattgaaagaggaaaagga
tctgcatgcaggatagtttgtactcagccaagaagaattagtgccatttcagttgcagag
agagtggctgcagaaagggcagaatcttgtggcaatggtaatagtaccggataccaaatt
cgtctccagagtcggttgccaaggaaacagggttctatcttatattgtacaacaggaatt
atccttcagtggcttcagtcagacccgcatttgtccagtgttagtcatatcgtgcttgat
gaaatccatgagagaaatctacagtcagatgttttaatgactgttgttaaagatcttctc
aattatcgacctgacctgaaaatagttttaatgagtgcaacattgaatgctgagaaattt
tcagaatattttggtaactgtccagtgatacatatacctggttttacttttccggttgtg
gagtatcttttggaagatataattgaaaaaataagatatgttccagaacaaaaagaacac
agatcccagtttaagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaagaa
aaagaagcaatctataaagaacgctggccaggttatgtaagggaattgcgaaaaaggtat
tctccaagcactatagatgttataggaatgatggatgatgataaagttgatctgaatttg
attgctgcccttattcgatacattgttttggaagaagaggatggtgcaatattggtcttt
ctaccaggttgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgttt
aaatcagacaggtttcttattatacccttacattcactgatgcctacagttaaccagaca
caggtatttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaacattgca
gagactagcattaccatagatgatgtagtttatgtaatagatggaggaaaaataaaggag
acacactttgacacacagaacaacatcagtacaatgtctgctgagtgggttagtaaagct
aatgctaaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctatcatctg
tataatggtcttagagcaagccttctagatgactatcaactgccagaaattttgagaacg
cctttggaagaactttgtttacaaataaagattttaaggctaggtggaattgcttacttt
ctgagtaggctaatggatccaccatcgaatgaagcagtgttactttccataaaacacctg
atggaactgaacgctttggataaacaagaagaattgacacctcttggagtccacttagca
cgattaccagttgagccacacattggaaaaatgattctttttggagctctgttctgttgc
ctcgacccggtgctcaccattgctgctagtcttagcttcaaagatccctttgtgattcca
ttgggaaaagaaaaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaaagt
gatcacctgacagttgtgaatgcatttgagggctgggaagaagctagacaacgtggtttc
agatatgaaaaagactattgctgggaatattttctgtcttcaaacacactgcagatgctg
cataacatgaaagggcagtttgctgagcatcttcttggagctggatttgtaagcagtaga
aatcctaaagatccaaaatctaatataaattcagataatgagaagataattaaagctgtc
atctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaaga
aaaatggtgaaagtttacacaaaaactgatggactagttgctattcatcccaaatccgtt
aatgtggagcaaacagagtttcactacaactggcttatctaccacctgaagatgagaaca
agtagtatatacttgtatgactgcacagaagtttctccatactgtctcttgttctttgga
ggtgatatttccattcagaaggataatgatcaggaaactattgctgtagatgaatggatt
atctttcagtctccagcaagaattgcccatcttgttaaggaattaagaaaggaactagac
atccttctgcaagagaagattgaaagtccccatcctgtagactggaaggacactaaatcc
agagactgtgcagtactctcagctattatagacttgctcaaaacacaggaaaaagcaact
cccaggaacttgccaccacgatttcaggatggatattacagctga
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