Lacinutrix venerupis: BWR22_04120
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Entry
BWR22_04120 CDS
T04680
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lvn
Lacinutrix venerupis
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvn03032
]
BWR22_04120
03400 DNA repair and recombination proteins [BR:
lvn03400
]
BWR22_04120
Enzymes [BR:
lvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BWR22_04120
DNA replication proteins [BR:
lvn03032
]
Prokaryotic type
DNA Topoisomerases
BWR22_04120
DNA repair and recombination proteins [BR:
lvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BWR22_04120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
APX99533
LinkDB
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Position
904564..906513
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AA seq
649 aa
AA seq
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MSDKKEEFNKHNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALA
GHCDNITVTINEDNSITTEDDGRGIPVDIHKKEGISALEVVMTKIGAGGKFDKDSYKVSG
GLHGVGVSCVNALSEHLTATVYRNGKIWEQEYERGKSLYPVKAIGDTDKRGTTVTFKPDP
TIFTQTLEYNYDTLASRMRELAYLNKGITVHLIDKRSKKEDGSYEGETFHSEEGLKEFIK
FLDATREPLMKDVISFEGEKNGVPVEVAMVYNTSYAENLHSYVNNINTHEGGTHLSGFRR
GLTHTLKKYADESGMLDKLKFDIAGDDFREGLTAIVSVKVQEPQFEGQTKTKLGNREVSA
SVSQAVSEMLSDYLEEHPEDAKTIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKL
SDCSEQDPEKCEVYLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMTHKVFENEEI
KNIFTALGVTIGTEEDSKALNLSKLRYHKIVIMCDADIDGSHIETLILTFFFRYMKELIE
NGHIYIATPPLYLIKKGAKKQYAWNDEERAALMAEYGDGAKIQRYKGLGEMNAEQLWDTT
MNPEFRTLRQIHIDNGVEADRVFSMLMGDEVPPRRDFIEKNAVYANIDA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaaaagaagagtttaataagcacaattattcggccgatagtattcaagca
ttagaaggaatggagcacgtacgtatgcgtccttcaatgtatattggagatgtaggagta
cgtggtttacaccatttagtttacgaggtagtagataactcaattgatgaagctttagct
ggacattgtgataatattacagtaacaattaacgaggataactcgattacaacagaagat
gatggtcgtggtattcctgtagacatacataaaaaagaaggtatttctgcactagaagtt
gtaatgactaaaattggagcaggtggaaaattcgataaagattcttataaagtatctggt
ggccttcacggtgttggtgtaagttgtgtaaatgcattgtctgaacatttaacagcaaca
gtttacagaaacggtaaaatttgggagcaagaatacgaacgtggtaaatctttatatcca
gtaaaagccattggcgatacagataaaagaggaacaacagtaacctttaaaccagatcca
acaatatttactcaaactttagagtataactacgatactttagcaagtagaatgcgtgaa
ttagcgtatttaaataaaggtattacagtacacttaatagataaaagaagtaaaaaagaa
gatggttcttacgaaggtgaaacatttcattctgaagaaggattaaaagaatttatcaaa
tttttagatgctacaagagaacctttaatgaaagatgtaatctcttttgaaggtgaaaaa
aatggcgtgccagttgaggttgcaatggtttataatacctcatatgcagaaaacttacac
tcttatgtaaataacattaatacacacgaaggaggtacgcacctttctggttttagacgt
ggtttaacacacacgcttaaaaaatatgcagatgaatcaggaatgttagacaaacttaag
tttgatattgcaggagacgattttcgagaaggtttaacagcaattgtatctgtaaaagtt
caagagccacaatttgaaggccaaacaaaaactaaattaggaaacagagaggtatctgca
tctgtaagtcaagcagtgtctgaaatgttatccgattatttagaagaacatccagaagat
gctaaaaccattgtacaaaaggtaatacttgcagcacaagcacgtcacgcagcacaaaaa
gcgcgtgaaatggtacagcgaaaaacagtaatgagtattggtggtttaccaggaaaatta
tcagactgttcagagcaagatccagaaaaatgtgaagtataccttgtagagggagattcg
gcaggtggaactgcaaaacaaggtcgtgatagagcatttcaagctattttaccattacga
ggtaaaattcttaatgtcgaaaaagctatgacacataaggtttttgaaaatgaagaaata
aaaaatatttttacagctttaggtgttactataggtacagaagaagatagtaaagcacta
aacctttcaaaattaagataccataaaatagtaatcatgtgtgatgccgatattgatggt
tctcacattgaaacacttatcttaacattcttcttccgttatatgaaagaattaatcgaa
aacggacacatttatattgcaacgccacctttatatttaattaaaaaaggagctaaaaag
cagtatgcatggaacgatgaagaacgtgcagcactaatggcagaatatggagatggagca
aaaatacagcgttataaaggtcttggagagatgaatgcagaacaactttgggatacaact
atgaacccagagtttagaacattacgtcaaattcatatagacaatggagtagaggcagat
agagtattctcaatgttaatgggagacgaagtgccaccaagacgtgattttatagaaaag
aatgctgtctatgcaaatattgatgcataa
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