KEGG   Limimaricola variabilis: T8T21_07160
Entry
T8T21_07160       CDS       T09625                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
lvr  Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lvr03400]
    T8T21_07160
Enzymes [BR:lvr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     T8T21_07160
    5.6.2.6  RNA 3'-5' helicase
     T8T21_07160
DNA repair and recombination proteins [BR:lvr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    T8T21_07160
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WPY95889
LinkDB
Position
1457476..1459908
AA seq 810 aa
MTALPPLFDDWFAKRGWCIHPHQREMLARADAPALMLIAPTGGGKTLAGFLPTLAELADG
SHKGLHTLYVSPLKALATDIRRNLTIPVEEMGLPIRIEDRTGDTKQTAKKRQRADPPHIL
LTTPESLALMVSYEDAPRIFAGLKRIVVDEIHALMEGKRGDQLMLSLGRLETLAPGLRRV
GLSATVEDPEALASLLAKHPEPCEIIEADPGPDPDISMLRTEAPPPWAGAGGGYAVREVL
EQVKKHKTTLIFHNTRAQAEIFFHKLWLANEDDLPIGIHHGSLSRQVRANVEAAMVAGEL
KAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECMAALEAVKAHELDGSPRGPGPLDVLCQHIMITACAGPFDEDALFTEVKTVGPYAGIS
RAQFDDCLDFVATGGYALRAYDKWKRLLRRPDGLWQLRDPRSALRIRMNIGTIQDADMLK
VRMRGGGGRPLGEVEEGFASSLTPGDTFLIGGQVVRYETLREMTVEVTRRADREPRIATY
AGAKMPTSAQLAHRILDDLQRPDWPELPRHTRDWLHLQREVSKMPERGRILVETFEHDGR
HHACFHTFAGRHAQQTLGLLLTRRMETLGLHPLGFVGTDYATLVWGLNELTDPAPLFEAH
ELREGLEGWLTSNAVMKRTFRGVASIAGLIEKNLPQVRKTGKQATFSSDILYDTLAKYDP
DHLILRVTRDEAMRGLVDFARVEEMLERTKGRVDLVRAARPTPLAAAMLLERDRVPVAGA
GRERLAEQEAARLLKESGLAAFGAPTVAGV
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgaccgcgctgccccccctcttcgacgactggttcgccaagcgcggctggtgcatccat
ccgcatcagcgcgagatgctcgcacgcgccgatgctccagccctgatgctgatcgcgcct
accgggggcggcaagaccctcgccgggttcctgccgacgctggccgagctggcggatggc
agccacaagggattgcacacgctctacgtctcgcccctgaaggcgctggccaccgacatc
cggcgcaacctcaccatcccggtcgaggagatgggcctgccgatccggatcgaggaccgt
accggcgacaccaagcagacggccaagaagcgccagcgtgccgatccgccgcatatcctg
ctgaccacgcccgaaagcctcgccttgatggtctcctacgaggatgcaccgcgcattttc
gcggggctcaagcgcatcgtggtggacgagatccacgcgctgatggagggcaagcgcggc
gatcagctgatgctgagcctcggacggctggaaaccctcgcgcccggcctgcgccgggtc
ggcctttcggccacggtcgaggaccccgaggcgctggcctctctactcgcgaagcatccc
gagccttgcgagatcatcgaggccgatcccggtcccgatcccgacatctccatgctgcgc
actgaggctccgccgccctgggcgggggccggcggcggctacgccgtccgcgaggtgctc
gagcaggtcaagaagcacaagacgacgctgatctttcacaacacccgtgcgcaggccgag
atcttctttcacaagctctggctcgccaacgaggatgacctgccgatcggcatccatcac
ggcagcctgagccgacaggtccgtgccaatgtcgaggctgcgatggtggcgggcgagctc
aaggccatcgtctgcaccggcagcctcgatctgggcatcgactggggcgacgtcgatctc
gtgatccagatcggcgcgcccaagaacgtgaaacggctcgtgcagcggatcggccgggcc
aaccaccgctacaacgccccctccaaggcgcttctggtgcccgccaaccgtttcgaggtg
gtcgaatgcatggccgcgctggaggcagtgaaggcgcacgagctcgacggctcgccccgc
gggcccggaccgctcgacgtgttgtgccagcacatcatgatcaccgcctgtgccggaccc
ttcgacgaggatgcgctcttcaccgaggtgaagaccgtcggcccctatgccgggatcagt
cgggcgcagttcgacgactgcctcgatttcgtcgccacgggcggctacgcgctgcgcgcc
tatgacaagtggaaacggctgctgcggcgccccgacgggctatggcagctgcgtgatccg
cgctctgccctaaggattcgcatgaatatcggcacgatccaggatgccgacatgctcaag
gtgcgtatgcgcggtggcggcggccggccattgggcgaggtcgaggagggcttcgcctcc
tcactcacccccggcgacaccttcctcatcggcgggcaggtggtgcgttacgaaaccctg
cgcgagatgacggtcgaagtgacccgccgcgccgaccgcgagccgcgcatcgccacctat
gcgggcgccaagatgccgacctcggcgcagctcgcgcatcgcatcctcgacgatctgcaa
cgccccgactggcccgagctgccgcgccatacgcgcgactggctgcatctccagcgcgaa
gtgtcgaagatgcctgagcgtggccgcatcctcgtcgagacctttgagcatgacgggcgt
caccatgcctgcttccacaccttcgcgggccggcacgcccagcagacgctcggcctgctg
cttacccgcaggatggagacgctcggcttgcacccgctgggcttcgtcggcacggactac
gcgacattggtctgggggctcaacgaactcaccgatccggcgccgttgttcgaggcgcat
gagttgcgcgagggactggaagggtggttgacctcgaacgcggtgatgaagcggaccttc
aggggggtcgccagcatcgccgggctgatcgagaagaacctgccgcaggttcgcaagact
ggcaagcaggcgacgttctcgtccgacatcctctatgacacgctggcgaaatacgatccc
gaccacctgatcctgcgcgtgacccgcgatgaggcgatgcgcggcctcgtcgatttcgcc
cgggtcgaggagatgctcgagcgtaccaagggccgggtcgatttggtccgcgccgctcgc
cccaccccgcttgccgcggcgatgctgctggagcgggaccgagtgcctgtggcgggcgcc
gggcgcgaacggctggccgagcaggaggcggcgcgcctgttgaaggagtcaggccttgcg
gccttcggtgcgcccaccgtcgcgggggtgtga

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