Yoonia vestfoldensis: LOKVESSMR4R_03627
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Entry
LOKVESSMR4R_03627 CDS
T04854
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lvs
Yoonia vestfoldensis
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvs03032
]
LOKVESSMR4R_03627 (hup)
03036 Chromosome and associated proteins [BR:
lvs03036
]
LOKVESSMR4R_03627 (hup)
03400 DNA repair and recombination proteins [BR:
lvs03400
]
LOKVESSMR4R_03627 (hup)
DNA replication proteins [BR:
lvs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOKVESSMR4R_03627 (hup)
Chromosome and associated proteins [BR:
lvs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LOKVESSMR4R_03627 (hup)
DNA repair and recombination proteins [BR:
lvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LOKVESSMR4R_03627 (hup)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
EspB
Motif
Other DBs
NCBI-ProteinID:
ARU02896
UniProt:
A0A1Y0EGZ2
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All DBs
Position
3599285..3599575
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AA seq
96 aa
AA seq
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MATKPMTKAQLVAAIADQTGMDKKAAGAALDAVTGIITSEVAGGGAVTLPGVGKIYCRER
PERMVRNPATGEQIKKEADKVVKVTIAKALKDSVNG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaccaatgaccaaagcgcagctggttgctgcaattgccgatcagaccggc
atggacaaaaaagcagcaggcgctgcgctggatgccgtgaccggcatcatcacatccgaa
gtggctggcggcggtgctgtcaccctgcccggcgtcggcaagatctattgccgcgaacgc
cccgagcggatggtgcgcaaccctgccaccggcgagcagatcaagaaagaagccgacaag
gttgtcaaagtgacgatcgccaaggccctgaaagacagcgtcaacggctaa
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