Legionella waltersii: SAMEA4504053_1889
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Entry
SAMEA4504053_1889 CDS
T06599
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lwa
Legionella waltersii
Pathway
lwa03410
Base excision repair
lwa03430
Mismatch repair
lwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4504053_1889 (recJ)
03430 Mismatch repair
SAMEA4504053_1889 (recJ)
03440 Homologous recombination
SAMEA4504053_1889 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lwa03400
]
SAMEA4504053_1889 (recJ)
DNA repair and recombination proteins [BR:
lwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SAMEA4504053_1889 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA4504053_1889 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAMEA4504053_1889 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
EryCIII-like_N
Motif
Other DBs
NCBI-ProteinID:
SNV05904
LinkDB
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Position
1:complement(1986450..1988180)
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AA seq
576 aa
AA seq
DB search
MLIKRRQLPDSIVNLQGLPDVLNRIFIARGITEASQLDKQLKALLPFNLLKGISEASLRL
EQALRSHQRILIIGDFDADGATSTALGITALRALGAKHVEYLVPNRFEFGYGLTPAIVDV
ASKWKPDLIITVDNGIASFEGVERANQLGIDVLITDHHLPAESLPRACAIVNPNQPGCEF
PSKSIAGVGVIFYVMLALRRQLASSNWFEEMNIAEPNMASFLDLVALGTVADVVGLDQNN
RIMVNQGMQRIKQGLCREGIRALAEISGRDLTRLRETDLGFAIAPRLNAAGRLDDMSLGI
ECLITSNPQQARDFCQQLDELNQERKSIETEMKQQAMEALEKLSVIAENKKLPVALCLHD
KTWHQGVIGILAGRMKERFHRPVIAFASVSDEELKGSARSVSGLNIRDVLAAIDKDKPGL
ITKFGGHAMAAGLSIRPEVLGEFREALLNEVQKYLDVSQCEGEILTDGPLHLQEFTIETA
KLIQEAGPWGQSFAEPVFDNVFEIIDQRLVGKHHLKLTLIPEQGQETIDAIAFNVDVNLW
PNHRIKHVHVAYKLDINYYQGRSKLQLLVQALNSVT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcttattaaacgacggcaactaccagactcaatagtaaatctgcaaggcttgcccgat
gtattaaatcgtatatttatagcgcgtggtattaccgaagcatctcagttggacaaacaa
ctcaaggcactgttgcctttcaatcttttaaaagggatttcagaagctagtttacgtctt
gagcaagccttgcgttcgcatcagcgtattttgatcataggcgatttcgatgcagatggt
gctacttctactgctttaggaataactgctttaagagcgctaggagcaaaacatgtcgaa
tatttggttccaaaccgctttgaatttgggtatgggcttaccccagcgatagttgatgtt
gctagcaagtggaaacccgatttaattattactgtcgacaatgggattgcaagctttgag
ggagtagaaagagctaaccaattaggtatcgatgttctgataacagatcatcatcttcca
gctgaatctttacctcgggcatgtgctattgtcaatcccaatcagcctggttgtgagttt
cccagtaagtcaattgcaggagtcggagttattttctatgtcatgctggctttgagaaga
caacttgcttcaagtaactggtttgaggaaatgaatattgctgaaccgaatatggctagt
tttctagatttggttgctttaggaactgtcgctgatgttgttggcctcgatcagaataat
cgtattatggtgaatcaaggtatgcagcgaatcaagcagggcttgtgtagagaaggaata
agagctttagcagaaatttctggaagagacttgacgcgcttacgagaaactgatcttggc
tttgctatagctccgcgcttaaacgctgcaggacgattagacgatatgtctctcggaatt
gagtgcttgatcacctccaatccccaacaggcaagagatttttgtcagcagctggatgag
ttaaaccaagaacgtaaatcaatagaaacagagatgaagcaacaagcgatggaggcttta
gagaagttatccgtcattgctgaaaataaaaagttaccggttgctttatgcttgcatgac
aaaacttggcatcagggagtaattggtattttagctgggcgaatgaaagaacgatttcat
cgtcctgtgattgcatttgcttctgtgagcgatgaagaacttaaaggttctgcaagatcc
gtttcaggattaaacattagagatgttcttgctgctattgataaggacaagccaggctta
attaccaagttcggtggccatgccatggcagcaggcttaagtattaggccagaggttttg
ggtgagtttagagaagctttacttaacgaagtgcaaaaatatttagatgtttctcaatgt
gaaggggaaattctcactgatggtccgctacatttacaagagttcactatagaaacggct
aaactcattcaggaagctgggccgtgggggcaatcttttgctgaaccagtgtttgataat
gtgtttgaaattattgatcagcgactggtaggcaaacatcacttaaaactaactctcatt
ccggagcaagggcaagagaccatagatgccattgcatttaatgttgatgtaaatctttgg
ccaaaccatcgtataaagcatgtgcatgtggcttataaactggatatcaactattatcaa
ggacgaagcaaactacagttgcttgtgcaggctttgaatagtgtcacctag
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