Leptotrichia wadei: JCM16777_1285
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Entry
JCM16777_1285 CDS
T06741
Name
(GenBank) putative pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lwd
Leptotrichia wadei
Pathway
lwd00040
Pentose and glucuronate interconversions
lwd01100
Metabolic pathways
lwd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lwd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JCM16777_1285
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JCM16777_1285
Enzymes [BR:
lwd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JCM16777_1285
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BBM43035
UniProt:
A0A7U6QYN5
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Position
complement(1340061..1341299)
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AA seq
412 aa
AA seq
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MKKIVLVISLMISLILCSAEKTDFIREVLAKNDGFASEGKGTTGGTQAVQKNIFKVTNKK
EFVAALGNRKNTEPKILMIYGTIDFDTDDNGKSLKMEDYMAKGYDFQKYLETHASKSSAP
KSLKEDQEAKREQSQKNQSKSITVHVPANTSIIGIKNAKLKGVDLVLDSNNIIIRNIMFE
PPYDYFPSWDPKDGKEGNWNSEYDSISIKGGTHIWIDHCHFQDGPETIEKYFNRKYEHRD
GLIDISNQSDYITLSYNIFENHNKAILIGNSDSKMTDEGKLNVTLHHNYFHNLVQRAPRV
RFGKVHVYNNYYQSDNKNSEYSYSYSLGVGKNSKIYAENNVAEVKDKDYKDFVKVFGGKE
LTTINNIFNGQKIDKFDESLSKVNWVPTLYQKIDATNEVKDKVLNNAGIFKK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagttttagtaattagtttaatgatttctttaatcttgtgttcggctgaa
aaaactgattttatacgagaagtattagctaaaaatgatggatttgcttcagaaggtaaa
ggaactacgggtggaactcaagctgttcagaaaaatatattcaaagttacaaataagaaa
gaatttgttgcagcacttggaaacagaaaaaatacggaacctaagattttgatgatatat
gggacaatagattttgatacagatgataatggtaagagtttaaagatggaagattatatg
gctaaagggtatgattttcaaaaatatttggaaactcatgcttctaaaagttcagcacct
aaaagtctgaaagaagatcaggaagcaaaaagagaacaatctcaaaaaaatcaaagtaaa
agtattacagtccatgttcctgccaatacaagtataattgggattaaaaatgcaaaatta
aaaggtgtagatttagtcctagattctaataatataattataagaaatataatgttcgag
cccccttatgattattttccatcatgggatccaaaagatggaaaagaaggtaactggaat
tccgaatatgacagtatttcaataaagggtggcactcatatttggatagatcattgccat
tttcaagatggacctgaaactattgaaaaatattttaatcgtaaatatgagcatagggat
gggttaattgatatatcaaatcaatcagattacataactttatcatataatatttttgaa
aatcataataaagcgattttgataggaaatagtgattcaaaaatgacagatgaagggaaa
ttaaatgtaactttgcatcataattattttcataatttagttcaaagagcaccaagagtg
agatttggaaaggttcatgtatataataattattatcaatcagacaataaaaatagtgaa
tacagttattcttattctttaggagttggaaaaaattcaaaaatatatgctgaaaacaat
gttgcagaagtaaaagacaaagattataaagattttgtaaaagtctttggtggaaaagaa
cttacaactattaacaatattttcaatggacagaaaattgataaatttgatgaaagttta
tcaaaagtgaattgggttcctacattatatcaaaaaatagatgctacaaatgaagtaaaa
gataaagttttaaataatgcgggaatatttaaaaaataa
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