Lysinibacillus sp. B2A1: C3943_26490
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Entry
C3943_26490 CDS
T05347
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyb
Lysinibacillus sp. B2A1
Pathway
lyb03420
Nucleotide excision repair
lyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3943_26490
03430 Mismatch repair
C3943_26490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyb03400
]
C3943_26490
Enzymes [BR:
lyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3943_26490
DNA repair and recombination proteins [BR:
lyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3943_26490
MMR (mismatch excision repair)
Other MMR factors
C3943_26490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
SLFN-g3_helicase
AAA_30
DEAD
AAA_22
AAA_16
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
AVK86764
UniProt:
A0A2S0JTH9
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All DBs
Position
5385659..5387962
Genome browser
AA seq
767 aa
AA seq
DB search
MENQNEWQEEKHHLEHSLNLIDYKKNELLLKEKGFKENAVALKKTFWNDVRVNLDTAEDV
DETFFAIKQQVELLSDSELAQQRAIRNVKVYERLQQSPYFARIDFLQNGHQDPLKIYIGV
ATLLDEQDENIVIYDWRAPISSMYYDYTPGGASYDTIAEEVHGEMLLKRQFIIKNGQLQS
MFNTGLTIGDDLLLDILAQNANEHIRSIVTTIQAEQNKIIRHVHSRYLIVEGVAGSGKTA
VALQRVAYLLYRYRNEMTADQILLITPNQLFNQYVHTVLPDLGEDNMQQLTFIEYAEKRL
GRQFQIEYPYEQLEDLLTEKNDAHYQTKLSTISFKASLAYKQLMDQYVSYLSNKGLLFKN
IVFRGERIISAKAITEYFYSFPFSMSIPDRLQLVKEWLLQQLTKLEREERRKEWVEEEAE
LLDKEDYSKSFKELLYEGRYTENSFDDFDQERKKLARQIAKKHFKPLRNSVNQLKFVHIL
GTYRQLFDLNNPIHKELQHLMPDNWEDICQQTLPNLAKRLIAYEDAAPFLYLQDKIEGQQ
TNTMIRHVLIDEAQDYSPFQLTVLQQLFPKARMTILGDGHQTIHPHTFSNPSLLDPQLYG
EQAEKMILTKSYRSTKQIIQLTAKILNDDSEVEAFNRNGPEPSITIVPNELALTEQIIQS
INNLSTKFETIAVICKTAAECSAVYEQLSNQVDIQLINHNTKQFKKGILLLPAYMAKGIE
FDAVLIYNASAANYSRENERYYFYTACTRAMHELHIYSINKLTYFLQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatcaaaatgaatggcaagaagaaaaacatcaccttgagcatagtttaaacctc
attgattacaaaaaaaacgaattactgcttaaagaaaaaggcttcaaggaaaatgctgtc
gccttgaagaaaactttttggaacgatgtcagagtcaatttagatactgctgaggatgtt
gacgaaaccttttttgcaattaagcaacaggtagagcttctatctgactcagagcttgca
cagcagcgtgcaattcggaatgtaaaggtttatgaacgtttacaacagtcaccctatttt
gctcgtattgactttttacaaaatgggcatcaagatcctttaaaaatttatataggtgtt
gccacattattggatgaacaggatgaaaatatagttatttatgattggcgtgcacctata
tcgagtatgtactatgattacacaccaggtggagcctcctacgacacaatagcagaagaa
gttcatggtgaaatgttactaaaacgacaatttattattaaaaatgggcagctacaatcc
atgtttaatactggccttaccattggtgatgacttattgcttgatatcctcgcacaaaat
gcaaacgagcatattcgcagtatcgttacaacgattcaagccgaacaaaataagattatt
cgccatgttcactcacgctatctcatcgtagagggtgttgcgggtagtggcaaaacagct
gttgctcttcaacgggtagcctatctgttgtatcgttatcgcaatgaaatgacggctgat
caaattttattgattacacctaatcaactttttaatcaatacgttcatacagtcttacct
gatttaggtgaagacaatatgcagcaattgacgttcatcgagtatgctgaaaaacgttta
ggtcgacagttccaaatagaatatccttacgagcagcttgaagatcttttaacagaaaag
aatgacgctcattatcaaacaaaattaagcactatttcttttaaagcgagccttgcttac
aaacaattaatggatcaatatgtaagctatttatcgaataaaggcttattatttaaaaat
attgtttttcgtggagaacgaattattagtgccaaggcaattacggaatacttctattct
ttccctttctcaatgtcgatacctgaccgcctacaattagtgaaagaatggttattgcag
caactaacgaaattggaaagggaggagcgcagaaaagaatgggtagaagaagaagctgaa
ctattagacaaggaggactactccaagtctttcaaggagcttttatatgagggacgctat
acagaaaactctttcgatgattttgatcaagaacgcaaaaaattagcgagacaaattgcc
aaaaaacactttaaaccattacgcaactccgttaatcagttaaagtttgttcatatatta
ggtacgtatcgccaactttttgatctgaataatcccattcataaagaattacagcacctt
atgccagacaattgggaggatatttgccagcaaacactccctaatttagcaaaacgtcta
attgcctatgaggatgcagcaccatttttatatttacaggacaaaatagaagggcaacag
acaaatacgatgatccgtcatgtactgattgacgaagcccaagattattcgccattccaa
ttaacggttttacagcagttatttccaaaggcacgtatgaccattttaggagatggacat
caaacgattcatccgcatacctttagtaatccttcactgcttgaccctcaattatatggg
gagcaggcagaaaaaatgattttaacgaaaagctatcgttcgacaaagcaaatcattcaa
cttactgccaagattttaaatgatgatagtgaagtagaggcatttaaccgaaatggtcca
gaaccgtcgattacgattgtgccgaatgaattggcattaactgagcaaattatccaaagc
atcaacaatctatctactaaatttgaaaccattgctgttatttgtaaaactgcagctgaa
tgctctgctgtttatgagcaattaagcaatcaagtagatattcaactaattaaccacaat
accaagcaatttaaaaagggtatattattactaccagcatatatggcaaaaggtatcgaa
tttgatgcagtacttatctataatgcatctgctgctaattattcaagagaaaacgaacga
tactatttctatacagcctgcacgagagctatgcatgagttgcacatttattccatcaat
aaattaacgtatttcctacaataa
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