Lysinibacillus sp. CD3-6: FH508_0011160
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Entry
FH508_0011160 CDS
T08381
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FH508_0011160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyc03400
]
FH508_0011160
DNA repair and recombination proteins [BR:
lyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FH508_0011160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
E3_UBR4_N
CDC24_OB3
Inhibitor_I9
Motif
Other DBs
NCBI-ProteinID:
UED82428
LinkDB
All DBs
Position
complement(2294654..2295472)
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AA seq
272 aa
AA seq
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MHTVWKGSISFGLVNIPVKLHAATENKDIKLRQLHKECHTPISYKKVCEGCNQEVTDENI
VKAYEYAKNKFVVLDEEEIENLRKENEDKAVEIIDFVKLGEIDPIYFERTYFLSPDTTGG
KAYALLRQTLEESGKIGVAKIIIRSKEQLAIVRVYQNALVMETIHFPDEVRSVQDVPNIP
SEPTIVQKELDAALMLVDQLTTVFNPEKYTDEYRNALMELIEEKKATSSVSASDKRPLPD
NVTDLMSALQASLDKTKKPATRKRATKAKKNA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtttggaaaggcagtatatcgtttggacttgtcaacattcctgtaaaatta
catgcagcaacagaaaataaagacatcaaattacgacagcttcataaagaatgccataca
cctattagctataaaaaagtatgtgagggctgcaaccaagaggttacagatgaaaatata
gtgaaagcatatgaatatgcaaaaaataaatttgtcgttcttgatgaggaagaaatagaa
aacttacgtaaagaaaatgaagataaggcagttgaaattattgattttgttaaattaggc
gaaattgatcctatttattttgaacgtacttattttttatcacctgatacaacgggcggt
aaggcatatgctctattgcgacaaacattagaggaatcaggtaaaatcggtgtagctaaa
attatcattcgttcaaaggaacagcttgcaattgttcgggtctatcaaaatgcgctcgtg
atggaaacaatccattttcctgatgaagtacgcagtgtacaagacgttcccaatattccg
agcgagccaactattgttcaaaaggaattggacgctgcactcatgctagtcgaccaatta
acaactgtctttaatccagaaaaatatacagatgaatatcgtaatgctttaatggaactt
atagaggaaaagaaagcgacaagttcagtttctgctagcgataaacgtcctttacccgat
aatgtcaccgatttaatgtcagcactccaagcttctttagataaaacaaaaaaaccagca
acaagaaaaagagcaaccaaagcgaagaaaaacgcgtaa
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