Lysinibacillus sp. CD3-6: FH508_0016170
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Entry
FH508_0016170 CDS
T08381
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
lyc
Lysinibacillus sp. CD3-6
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lyc03000
]
FH508_0016170
Transcription factors [BR:
lyc03000
]
Prokaryotic type
Helix-turn-helix
Other families
FH508_0016170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_4
PAS_9
AAA_5
HTH_30
Mg_chelatase
PAS_8
sCache_like
HTH_28
HTH_1
AAA
AAA_7
HTH_20
bpMoxR
GdpP_PAS
BrkDBD
Motif
Other DBs
NCBI-ProteinID:
UED78979
LinkDB
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Position
3245967..3247649
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AA seq
560 aa
AA seq
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MNNELQRYTAFLGANIIAVDKSFKVKWWHFNESISLNIQVDMPIDFFAAIDVTSLHQPQQ
LQIQDQLLSFTIEPFYFPEQLYIVSVENLVDFQHSLQNKVFVLEEIIEHLDEGIIVSNED
GDIIYYNEALAKMEEHKKEDMLGKKLWDAYNYQDRRLSEHNHILKTAKPIYTKYRAHAYS
ENEPKFVGYSSFPIQKDNKTIGVFSITHTEKSLRNQLQQTLDSKRETMEVPEEVKRNNGT
IYTFQDIKGNSHELLQTISEAKNIANYNTDTLIVGETGTGKELFAQSMHNLSPRVTKPFV
AINCAAIPATLLESTLFGSVKGAFTGATNQEGLFEYAKDGTLFLDEINSLPMELQPKLMR
VLQERAVRRVGSNTLIPIECTVFSASNEDPELLTAGERMRLDLFYRIAHSSIYIPPLRER
PEDILFFIQHFLHKNVLKYMKANITIKPDLYQILVAYDWPGNVRELEHLIENLVIQASSD
SDITEDMLPRYLKNKISIKAAPSKKRPFKALMHTNEEQYIRKVLQQCDGNISAAAKQLNI
SRQSLQYHMKKLAIQKEELI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaattgcagcgttacacagcttttttaggcgcgaatatcattgcagtagac
aaatcattcaaggtgaaatggtggcatttcaatgaaagtatctcgttaaatatccaagtt
gatatgccaatagatttcttcgctgccattgacgtgacaagtttgcatcaaccgcaacaa
ttgcaaatacaagaccagcttctatcttttacaatagagcctttttattttccagagcaa
ttgtatattgtttctgtagaaaacttagtagatttccagcattccttacaaaataaagtt
tttgtgctagaggaaattatagagcatttagatgaagggattattgtgagcaatgaagac
ggggacattatttattacaatgaggcactcgctaaaatggaggagcataaaaaagaggac
atgcttggcaagaagctgtgggatgcgtataactatcaagatcgtagactatcagagcat
aatcatattttaaaaacagctaaacccatttatacgaaatatagagcacatgcctattca
gaaaatgaacctaaatttgtaggttacagttcgttccctattcaaaaggataataaaacc
attggtgttttttcaattacccatacggaaaaaagcttacgaaatcaattacaacaaaca
ttggattccaaacgtgagacaatggaagtacctgaagaagtcaaacggaataatggaacg
atttacacatttcaagatatcaaagggaacagtcacgagctccttcaaacaatatctgaa
gcgaaaaatattgctaattataatacggatacattaatagttggggaaactggcacaggt
aaagaattgtttgcccaaagcatgcataatttaagccctcgtgtaacaaagcccttcgtt
gccataaactgtgctgccatccctgctacattgttagagagcacgctctttggctcggtt
aaaggggcttttactggtgctaccaaccaagaaggtctttttgaatatgccaaagatggc
actctttttctagatgaaattaattcattaccaatggagcttcaaccaaaattaatgcgt
gtcctgcaagaacgtgctgttcgacgagtgggcagtaatacacttattcctattgaatgt
acggtgtttagtgcatccaatgaagatccagagctactaactgctggtgagcgaatgcgg
cttgacttattttatcgtatagcccattcaagtatatatatccccccgttacgtgagaga
ccagaggatatccttttctttattcagcattttttacataaaaatgtgctgaaatatatg
aaggcaaatatcacgattaagcctgacctttatcaaattcttgttgcttacgattggcct
ggcaatgtacgtgaactggagcacttaattgaaaaccttgtaattcaagcgagctctgac
agcgatattacagaagatatgctgccacgttatttaaaaaataaaatttcaataaaagcg
gccccatctaaaaaacgccctttcaaagcacttatgcatacaaatgaagaacagtatata
cgaaaagtgctacaacagtgtgatggaaatatatcagctgctgcgaaacaattaaatatt
tcccgacaatcgttgcaatatcatatgaaaaaactcgcgattcaaaaagaagagcttata
taa
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