Lysinibacillus sp. CD3-6: FH508_0018315
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Entry
FH508_0018315 CDS
T08381
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lyc
Lysinibacillus sp. CD3-6
Pathway
lyc00300
Lysine biosynthesis
lyc01100
Metabolic pathways
lyc01120
Microbial metabolism in diverse environments
lyc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FH508_0018315 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lyc01002
]
FH508_0018315 (pepV)
Enzymes [BR:
lyc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FH508_0018315 (pepV)
Peptidases and inhibitors [BR:
lyc01002
]
Metallo peptidases
Family M20
FH508_0018315 (pepV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UED79384
LinkDB
All DBs
Position
complement(3683034..3684437)
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AA seq
467 aa
AA seq
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MDWLHAAKERQDELVRELQELVQINSVLDEKTITENVPFGNGPLKALEWLLAKGEAEGLQ
TKNVDNYAGHIEMGQGEELLGILCHVDVVPEGDETNWTYPPFSGTIADGKLFARGAIDDK
GPTIAAWMGMKLVKDAGIPLNKRVRMIIGTDEETGFRCVDHYFKNEEMPTFGFAPDADFP
LINAEKGIAELVFSQNKSGDATKEQLLLFNAGKRPNMVPDFAKATIQLVSAQFEQNFQTF
LSKNQLEGSLLKEGSRYIITIKGKAAHAMEPEKGINAAVYLAAFLQQELTTEGSKQFVDF
IADVFHQDHYGNALALQFEDDMSGKTTLNPGIVTYDVAQGGSIVVSFRYSVTYPFDQKIT
EAQRLAADKGLSLDVQDNSKPHYVSEDDPLIQTLAAVYRRQTGDNDTPLLSTGGGTYARV
LKKGVAFGMLFPGDPDVMHRADEYVIVDKLVQAAAIYAEAIAELAGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggattggttacatgctgcaaaggaaagacaagatgagttagtaagagaattacaggag
cttgtgcaaattaatagtgtattggatgaaaaaacgataacagaaaatgtgccgtttggt
aatggaccgctaaaggcactggaatggttgttagcaaagggtgaagctgaagggctacaa
acgaaaaatgttgataattatgctggacatattgaaatgggccaaggtgaagaattactc
ggtattttatgtcatgttgatgtagtgcctgaaggtgatgaaacgaattggacttatcca
ccttttagtggcacgattgccgatgggaaattatttgcccgaggtgcaatagacgataaa
ggcccaacgattgctgcatggatgggcatgaagcttgtgaaagatgcaggcattccatta
aacaaacgcgtacgaatgattatcggtacggatgaagaaacaggcttccgctgtgtcgac
cattattttaaaaatgaggaaatgccaacattcggttttgcaccagatgcagacttccca
ctcataaatgccgaaaaaggcatcgctgagcttgtgttctctcaaaataaatctggggat
gcgacgaaagaacagctactactatttaatgctgggaagcgtccaaatatggtaccagat
ttcgcaaaagcgacaattcaattagtatctgcacaattcgaacagaattttcaaacattt
ttaagcaaaaatcagctagaaggctctttattaaaagagggttctcgctatataataact
atcaaaggaaaagcagctcacgcaatggaacctgagaaggggatcaatgcagctgtctac
cttgcagcatttttacagcaagaattgacgacagaaggaagtaagcaatttgtcgatttt
atcgcagatgtattccatcaagaccattatggcaacgcattagctttgcaatttgaggat
gatatgtctggcaaaacgacattaaatccaggtattgttacttatgatgtagcccaagga
ggaagcatagtcgttagtttccgctactctgtaacgtatccatttgatcaaaaaattaca
gaggctcaacgtttagctgctgacaaaggattatcactcgatgttcaagataactcaaaa
cctcattatgtcagtgaggacgatccgttaatccaaacgttagctgctgtttatcgccga
caaacaggggacaacgatacacctttgctttcgactggtggtggtacgtatgcgcgcgtc
ttgaaaaaaggtgtggcattcggcatgcttttccctggtgatccagatgtaatgcatcgt
gcggatgaatatgtaattgttgataaattagtacaagctgctgctatttatgcagaagct
attgcagaacttgctgggaagtaa
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