Lysinibacillus sp. PLM2: MTP04_03360
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Entry
MTP04_03360 CDS
T09546
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyp03016
]
MTP04_03360
Enzymes [BR:
lyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MTP04_03360
Transfer RNA biogenesis [BR:
lyp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MTP04_03360
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BDH60206
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All DBs
Position
335714..336280
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AA seq
188 aa
AA seq
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MADNHHYFLAVKLPKEVKEFIGEWVETNQQQFPFSRWVHPEDYHITLAFLGFAEKDQLEQ
VNELMGPVLSEEISFEMTVNGFGTFGPPTSPRIFWAGVKESEDLKQLQKKIYEMCIKIGF
QLDKKPFKPHITIARKWKGEEPFDKGSLNSLKTNELSFHVNEIVLYETHLDKTPKYHEFS
RFPIVATN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaccatcattatttcttggcagtaaagctcccgaaagaagtgaaggaattt
attggcgagtgggtagaaacaaatcaacaacaatttccgttttcgagatgggtgcatccg
gaagattatcacattactcttgcctttttaggatttgcagagaaggatcaattggaacaa
gtgaatgaattaatgggtccagtgttatcagaagaaatatcatttgaaatgactgttaac
ggattcggtacttttggaccaccaactagtccacgaattttttgggcgggtgtcaaagaa
tcagaggatttaaagcaattacagaaaaaaatctatgaaatgtgcataaaaattggtttt
caattagataaaaaaccatttaaaccacacattacaatagcccggaaatggaagggtgaa
gaaccctttgataaggggagcttaaattctttaaaaacaaatgagctatcatttcatgtg
aatgaaattgtactctatgaaacgcatttagataaaacgccaaaatatcatgaattttcc
cgtttcccaattgtggcgacaaattag
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