Lysinibacillus sp. PLM2: MTP04_34920
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Entry
MTP04_34920 CDS
T09546
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MTP04_34920 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_34920 (ku)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MTP04_34920 (ku)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Prok-RING_4
SLX9
DUF4931_N
Motif
Other DBs
NCBI-ProteinID:
BDH63362
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All DBs
Position
complement(3568497..3569333)
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AA seq
278 aa
AA seq
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MHTVWKGSISFGLVNIPVKLHTATENKDIKLRQLHKECSSPINYKKVCPVCDKEVGNEDI
VKAYEYSKNKYVVLDDEELENLKKESEDKAVEIIEFVQLNEIDPIYFERSYFLAPDSGGG
KAYALLRSALKESGKIGVAKITIRSKEQLAIVRVYGDTLLMETIHFPDEVRKADEVPNIP
SEDKIADKELDTALMLIEQLTEKFDPEKYNDDYRTALLELIEKKKSGEVVVTAAEKETKV
PSDMTDLMAALQASLDKTKEKTKQPTVRKRKTPVKKKA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgcatacagtctggaaaggtagtattagttttggacttgtgaatattccagtaaaatta
catactgcgacggaaaacaaagatattaaattgcgccaattgcataaagaatgtagtagt
ccaatcaactataaaaaagtatgtcctgtatgtgataaggaagtaggaaatgaagatatc
gtaaaagcttatgaatactctaaaaataaatacgttgtacttgatgacgaagaattagag
aacttgaagaaagaaagtgaagataaggcagtcgaaattattgaatttgtccaattaaat
gaaattgaccctatttattttgaacgcagctactttctagcaccagatagtggtggtggt
aaagcctatgcattactaagaagtgcattaaaagaatctgggaaaataggtgttgccaaa
ataaccattcgttcaaaggaacaactagcaatcgttcgagtttatggtgacacattgtta
atggagacaattcattttcctgatgaagttagaaaggctgatgaagttccaaatataccg
agtgaagataagatagccgataaagaattggatacggctttaatgttaattgaacaatta
acagaaaaattcgatcctgaaaaatataacgatgattatcgaacagcactacttgaacta
atcgagaagaaaaaatctggagaggttgtagtaaccgctgccgagaaggaaacaaaagta
ccttcagatatgacggatttaatggcagctttacaagcatcattagacaaaacaaaagaa
aaaacaaagcaacctacagtccgaaagcgaaaaacaccagtaaagaaaaaagcataa
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