Mycobacterium tuberculosis variant africanum: MAF_00030
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Entry
MAF_00030 CDS
T01575
Symbol
recF
Name
(GenBank) DNA replication and repair protein
KO
K03629
DNA replication and repair protein RecF
Organism
maf
Mycobacterium tuberculosis variant africanum
Pathway
maf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAF_00030 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maf03400
]
MAF_00030 (recF)
DNA repair and recombination proteins [BR:
maf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MAF_00030 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ABC_tran
RsgA_GTPase
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
CCC25077
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Position
3281..4438
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AA seq
385 aa
AA seq
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MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPL
IRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPE
DLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVF
DTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPS
EQSDTDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWS
LAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIP
AGWDARRVHIDVRADDTGSMSVVLP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtccgtcatttggggctgcgtgacttccggtcctgggcatgtgtagatctggaa
ttgcatccagggcggacggtttttgttgggcctaacggttatggtaagacgaatcttatt
gaggcactgtggtattcgacgacgttaggttcgcaccgcgttagcgccgatttgccgttg
atccgggtaggtaccgatcgtgcggtgatctccacgatcgtggtgaacgacggtagagaa
tgtgccgtcgacctcgagatcgccacggggcgagtcaacaaagcgcgattgaatcgatca
tcggtccgaagtacacgtgatgtggtcggagtgcttcgagctgtgttgtttgcccctgag
gatctggggttggttcgtggggatcccgctgaccggcggcgctatctggatgatctggcg
atcgtgcgtaggcctgcgatcgctgcggtacgagccgaatatgagagggtgttgcgccag
cggacggcgttattgaagtccgtacctggagcacggtatcggggtgaccggggtgtgttt
gacactcttgaggtatgggacagtcgtttggcggagcacggggctgaactggtggccgcc
cgcatcgatttggtcaaccagttggcaccggaagtgaagaaggcataccagctgttggcg
ccggaatcgcgatcggcgtctatcggttatcgggccagcatggatgtaaccggtcccagc
gagcagtcagataccgatcggcaattgttagcagctcggctgttggcggcgctggcggcc
cgtcgggatgccgaactcgagcgtggggtttgtctagttggtccgcaccgtgacgaccta
atactgcgactaggcgatcaacccgcgaaaggatttgctagccatggggaggcgtggtcg
ttggcggtggcactgcggttggcggcctatcaactgttacgcgttgatggtggtgagccg
gtgttgttgctcgacgacgtgttcgccgaactggatgtcatgcgccgtcgagcgttggcg
acggcggccgagtccgccgaacaggtgttggtgactgccgcggtgctcgaggatattccc
gccggctgggacgccaggcgggtgcacatcgatgtgcgtgccgatgacaccggatcgatg
tcggtggttctgccatga
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