Paramagnetospirillum magneticum: amb3187
Help
Entry
amb3187 CDS
T00305
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit
KO
K03089
RNA polymerase sigma-32 factor
Organism
mag
Paramagnetospirillum magneticum
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mag03021
]
amb3187
Transcription machinery [BR:
mag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
amb3187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_25
UCR_14kD
HTH_19
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BAE51991
UniProt:
Q2W2D4
LinkDB
All DBs
Position
3451800..3452690
Genome browser
AA seq
296 aa
AA seq
DB search
MTAIASSLSLAPEGNLTRYLQDIRKFPMLPPEEEYLLAKRFREHGDLPAANRLVTSHLRL
VAKIAMGYRGYGLPLGELISEGNVGMMQAVRRFDPERGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIEEGDMSAENVAKIATKLEVTEDEVVTMNRRL
SSPDHSLNAPVRAEGEGEWQDWLVDDHEDQETELGEREELGQRRQMLTSALEALNDRERA
ILIQRRLTEDPATLEDLSQRYGISRERVRQIEVRAFEKLQKSVKSASAQAEAQNRA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaatcgcttccagtctgtcgctcgcgcccgaaggcaacctgacgcgctacctt
caggacattcgcaaattccccatgctgccgccggaggaagagtacctcctggccaagcgc
ttccgcgaacatggagatttgccggccgccaaccggctggtgaccagccatctgcggctg
gtggccaagatcgccatgggctaccgcggctatggcctgccgctgggcgagctgatcagc
gaaggcaatgtgggcatgatgcaggcggtgcgccgcttcgaccccgaacggggcttccgt
ctggccacctatgccatgtggtggatccgcgccgccatccaggaatacatcctgcattcc
tggtcgctggtaaagatgggcaccaccgccgcgcaaaagaagctgttcttcaacctgcgc
aagctcaagggccagatgcaggccatcgaggaaggcgacatgtccgccgagaacgtggcc
aagatcgccaccaagctggaggtgaccgaggacgaggtggtcaccatgaaccgccggctg
tccagccccgatcactccctgaatgcgccggtgcgcgccgagggcgagggcgagtggcag
gactggctggtggatgaccatgaggaccaggaaaccgaactgggcgagcgcgaggagctt
ggacagcgccggcagatgctgaccagcgccctggaagccctcaacgaccgcgagagggcc
atcctgatccagcgccgcctcaccgaagaccctgccaccctggaggacctgtcccagcgc
tacggaatctcgcgcgagcgggtgcgccagatcgaggtgcgggctttcgagaagctgcag
aaatcggtgaagtccgcctccgcccaggccgaggcccagaaccgggcgtaa
DBGET
integrated database retrieval system
