KEGG   Monopterus albus (swamp eel): 109951844
Entry
109951844         CDS       T05607                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb04510  Focal adhesion
malb04512  ECM-receptor interaction
malb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:malb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109951844
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109951844
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109951844
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:malb00535]
    109951844
Proteoglycans [BR:malb00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   109951844
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 109951844
NCBI-ProteinID: XP_020442217
LinkDB
Position
Unknown
AA seq 687 aa
MALSGICRELLLVLLLHIVLICSAQRGPVGPRGPPGPPGAAGVPGVDGIDGDRGEDSTVD
GGPGPDGDNGKDGASGAPGLPGKEGPVGPSGDPGPVGPKGPKGDPGPRGPPGEPGVGPDG
LDGIPGTDGLPGELGKAGPPGARGRRGQDGLPGPAGPRGLPGVYEGEDLCPNACPSALTG
HAGLPGMKGHKGAKGESGEPGRQGHKGEEGEQGPPGEVGAQGPPGPGGPRGFPGIMGSKA
ERGPRGEPGGAGPRGVQGAPGDPGRRGAIGETGPKGALGDQGPSGIRGPPGPKGDPGLPG
PDGRDGIPGLPGSKGLPGKSGAPGDAGPQGLPGVPGAYGQKGHSGPKGNTGNPGAVGLMG
SPGKEGERGEQGEVGPVGPRGGPGERGERGPDGPPGLPGARGSKGDKGLPGLPGPAGYRG
QTGDRGVVGLSGPKGVQGPPGAEGTPGERGDMGDEGEPGEKGSRGPPGETGSKGPEGGRG
QTGKEGKPGQPGPRGMQGDVGVPGLPGAQGPAGRSPTDTHIKQVCMRVMQEQLAQLAGIF
SRPETDNTGLPGPPGPPGPPGPTGENGFPGHPGSRGLPGLKGPPGLMGLKGPKGDQGDRG
DRGPTTRGPKGEPGAPGLPGGPGRSAYGTDGRDGQRGPRGVPGIPGVPGLPGPAGLNGYC
EPSQCILPMVASPVSAKDSSMKGPSEM
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggctctgtccgggatttgtcgggagcttttgttggtgcttttactgcacattgtgctg
atttgctctgctcagagaggcccggtcggtcccagaggccctccggggcccccaggagca
gccggtgtgcccggagtggatggcatcgatggcgacagaggagaagactccactgtagac
ggtggaccaggccccgacggtgataacggcaaagacggagcttctggagctccaggcctt
cctggcaaagaaggacctgtcggaccttctggggaccctggccctgtggggccaaaagga
ccaaaaggggacccggggcctcgggggcctcctggggagcctggtgtggggcctgacggg
cttgatggtattcctggtacagatgggcttccaggtgaactcggcaaagctggaccccct
ggggcaagaggcaggaggggtcaggatggtcttcctggtcctgctgggccacgggggctt
ccaggcgtgtatgaaggcgaggacctgtgtcccaacgcctgcccctctgccctgactggg
cacgctggtctccccggcatgaaaggccacaaaggagctaagggtgaatcaggtgaacct
ggaagacaagggcacaagggagaagagggcgaacaaggaccgccaggagaagtcggagca
caaggaccaccaggcccaggtggaccaagaggcttcccaggaataatgggctccaaagcg
gaaaggggacctcgtggagaacctggaggtgcaggtcctcgcggagtccagggagcccca
ggtgatccaggccgaagaggagccataggtgagactgggccgaagggagcgctgggggac
cagggtccatctggaatcagaggaccaccaggaccaaaaggagaccctggccttcctggt
ccagatggtcgtgatggaatacccggactgccaggatccaagggtcttccagggaaaagt
ggggctccaggtgatgccggcccacaaggacttcctggtgtgccaggtgcttatggccaa
aaaggacatagtggtcccaagggtaacactggtaatccaggagctgtaggactgatgggg
tctccaggaaaagaaggcgaacgtggcgagcagggagaggtggggcctgtcggacccaga
ggaggaccaggtgaacgaggggaaagagggcctgacgggcctccaggattaccaggagcc
aggggaagcaaaggggataagggccttccaggacttcctggcccagctggatatcgtggc
cagacaggagacaggggtgtagttggtctcagtgggccaaagggagtccagggacctcca
ggtgctgagggaacaccgggagaacgaggcgacatgggtgatgaaggcgagccaggagag
aaaggatcgagaggcccgccgggagagacaggaagtaaaggacctgaaggtggccgagga
cagacggggaaagagggcaagccgggtcaaccagggcctcgcggcatgcagggtgacgta
ggggtaccaggtctgccgggagcacagggaccagcgggaagatcgccgacagacacgcac
attaaacaagtctgcatgagggtaatgcaagagcagctggcccagctagcaggcatcttt
agcaggcctgagacagacaacaccgggctgcctggtcctcctggcccacctggacctcct
ggtcccaccggagaaaacggtttccctggacaccctggatcacgaggactgcctggtcta
aagggtccacctggtctaatgggtctcaaaggacccaaaggcgaccagggtgatagaggg
gaccgaggacccacaacaagaggacccaagggagagccaggtgcccctggtctaccaggt
ggaccggggcgatcggcttacggcacagatggccgtgacggacagaggggacctcgtggt
gttcccggtattccaggtgttcctgggcttcccggtcccgccggtctgaacggttattgt
gagccgtcacagtgcatcctgccaatggtggcgtcgccggtttcagcaaaggactccagc
atgaagggccccagtgagatgtga

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