Monopterus albus (swamp eel): 109951844
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Entry
109951844 CDS
T05607
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb04510
Focal adhesion
malb04512
ECM-receptor interaction
malb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109951844
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109951844
09142 Cell motility
04820 Cytoskeleton in muscle cells
109951844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
malb00535
]
109951844
Proteoglycans [BR:
malb00535
]
Extracellular matrix (ECM) proteoglycans
Others
109951844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109951844
NCBI-ProteinID:
XP_020442217
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MALSGICRELLLVLLLHIVLICSAQRGPVGPRGPPGPPGAAGVPGVDGIDGDRGEDSTVD
GGPGPDGDNGKDGASGAPGLPGKEGPVGPSGDPGPVGPKGPKGDPGPRGPPGEPGVGPDG
LDGIPGTDGLPGELGKAGPPGARGRRGQDGLPGPAGPRGLPGVYEGEDLCPNACPSALTG
HAGLPGMKGHKGAKGESGEPGRQGHKGEEGEQGPPGEVGAQGPPGPGGPRGFPGIMGSKA
ERGPRGEPGGAGPRGVQGAPGDPGRRGAIGETGPKGALGDQGPSGIRGPPGPKGDPGLPG
PDGRDGIPGLPGSKGLPGKSGAPGDAGPQGLPGVPGAYGQKGHSGPKGNTGNPGAVGLMG
SPGKEGERGEQGEVGPVGPRGGPGERGERGPDGPPGLPGARGSKGDKGLPGLPGPAGYRG
QTGDRGVVGLSGPKGVQGPPGAEGTPGERGDMGDEGEPGEKGSRGPPGETGSKGPEGGRG
QTGKEGKPGQPGPRGMQGDVGVPGLPGAQGPAGRSPTDTHIKQVCMRVMQEQLAQLAGIF
SRPETDNTGLPGPPGPPGPPGPTGENGFPGHPGSRGLPGLKGPPGLMGLKGPKGDQGDRG
DRGPTTRGPKGEPGAPGLPGGPGRSAYGTDGRDGQRGPRGVPGIPGVPGLPGPAGLNGYC
EPSQCILPMVASPVSAKDSSMKGPSEM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtccgggatttgtcgggagcttttgttggtgcttttactgcacattgtgctg
atttgctctgctcagagaggcccggtcggtcccagaggccctccggggcccccaggagca
gccggtgtgcccggagtggatggcatcgatggcgacagaggagaagactccactgtagac
ggtggaccaggccccgacggtgataacggcaaagacggagcttctggagctccaggcctt
cctggcaaagaaggacctgtcggaccttctggggaccctggccctgtggggccaaaagga
ccaaaaggggacccggggcctcgggggcctcctggggagcctggtgtggggcctgacggg
cttgatggtattcctggtacagatgggcttccaggtgaactcggcaaagctggaccccct
ggggcaagaggcaggaggggtcaggatggtcttcctggtcctgctgggccacgggggctt
ccaggcgtgtatgaaggcgaggacctgtgtcccaacgcctgcccctctgccctgactggg
cacgctggtctccccggcatgaaaggccacaaaggagctaagggtgaatcaggtgaacct
ggaagacaagggcacaagggagaagagggcgaacaaggaccgccaggagaagtcggagca
caaggaccaccaggcccaggtggaccaagaggcttcccaggaataatgggctccaaagcg
gaaaggggacctcgtggagaacctggaggtgcaggtcctcgcggagtccagggagcccca
ggtgatccaggccgaagaggagccataggtgagactgggccgaagggagcgctgggggac
cagggtccatctggaatcagaggaccaccaggaccaaaaggagaccctggccttcctggt
ccagatggtcgtgatggaatacccggactgccaggatccaagggtcttccagggaaaagt
ggggctccaggtgatgccggcccacaaggacttcctggtgtgccaggtgcttatggccaa
aaaggacatagtggtcccaagggtaacactggtaatccaggagctgtaggactgatgggg
tctccaggaaaagaaggcgaacgtggcgagcagggagaggtggggcctgtcggacccaga
ggaggaccaggtgaacgaggggaaagagggcctgacgggcctccaggattaccaggagcc
aggggaagcaaaggggataagggccttccaggacttcctggcccagctggatatcgtggc
cagacaggagacaggggtgtagttggtctcagtgggccaaagggagtccagggacctcca
ggtgctgagggaacaccgggagaacgaggcgacatgggtgatgaaggcgagccaggagag
aaaggatcgagaggcccgccgggagagacaggaagtaaaggacctgaaggtggccgagga
cagacggggaaagagggcaagccgggtcaaccagggcctcgcggcatgcagggtgacgta
ggggtaccaggtctgccgggagcacagggaccagcgggaagatcgccgacagacacgcac
attaaacaagtctgcatgagggtaatgcaagagcagctggcccagctagcaggcatcttt
agcaggcctgagacagacaacaccgggctgcctggtcctcctggcccacctggacctcct
ggtcccaccggagaaaacggtttccctggacaccctggatcacgaggactgcctggtcta
aagggtccacctggtctaatgggtctcaaaggacccaaaggcgaccagggtgatagaggg
gaccgaggacccacaacaagaggacccaagggagagccaggtgcccctggtctaccaggt
ggaccggggcgatcggcttacggcacagatggccgtgacggacagaggggacctcgtggt
gttcccggtattccaggtgttcctgggcttcccggtcccgccggtctgaacggttattgt
gagccgtcacagtgcatcctgccaatggtggcgtcgccggtttcagcaaaggactccagc
atgaagggccccagtgagatgtga
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