KEGG   Monopterus albus (swamp eel): 109957619
Entry
109957619         CDS       T05607                                 
Symbol
vps4b
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03250  Viral life cycle - HIV-1
malb04144  Endocytosis
malb04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109957619 (vps4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109957619 (vps4b)
  09143 Cell growth and death
   04217 Necroptosis
    109957619 (vps4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:malb04131]
    109957619 (vps4b)
   03400 DNA repair and recombination proteins [BR:malb03400]
    109957619 (vps4b)
Membrane trafficking [BR:malb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    109957619 (vps4b)
DNA repair and recombination proteins [BR:malb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109957619 (vps4b)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 AAA_5 TIP49 AAA_14 AAA_22 RuvB_N IstB_IS21 AAA_25 AAA_18 AAA_17 DUF815 AAA_2 AAA_33 RNA_helicase nSTAND3 AAA_24 PhoH Mg_chelatase AAA_7 Parvo_NS1 NACHT AAA_28 ResIII Sigma54_activat DUF5906 bpMoxR CLEC16A_C
Other DBs
NCBI-GeneID: 109957619
NCBI-ProteinID: XP_020451268
LinkDB
Position
Unknown
AA seq 438 aa
MATNNNLQKAIDLASKAAQEDKAQNYEEALRLYQAAVQYFLHVVKYEAQGDKAKQSIRAK
CAEYLDRAEKLKEYLKKKEKAPPAKPVKESQSDEKGNDSDEGDDPEKKKFQNQLSGAIVM
EKPNIKWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKA
VATEANNSTFFSISSSDLVSKWLGESEKLVKNLFTLAREHKPSIIFIDEIDSLCGSRSEN
ESEAARRIKTEFLVQMQGVGNDNDGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPEEHAR
SFMFKLHLGSTPNSLTDSDFVTLGKKTNGFSGADISVIVRDALMQPVRKVQSATHFKRVR
GQSRTDPKVTVDDLLAPCSPGDPNAIEMGWMDVPGEKLMEPIVCMSDMMRSLANTKPTVN
EQDLDKLKKFTDDFGQEG
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggctaccaacaacaatttacagaaagctattgatcttgccagcaaagcggctcaagag
gataaagctcaaaactatgaggaggctctgcgtctctaccaggctgctgttcagtacttt
cttcatgtggtgaaatatgaagcccagggtgacaaagctaaacagagcattcgggcaaaa
tgtgctgaatacttggacagagcagagaagttgaaggagtatctaaagaagaaagagaaa
gctcctcctgctaagcctgtcaaagagtcccagtctgatgagaaaggcaatgacagtgat
gaaggtgatgatccagagaagaagaagtttcaaaatcaactctcaggtgcaattgttatg
gagaaaccaaacatcaagtggaatgatgttgctggtttagagggagccaaggaagcactg
aaagaagctgttattcttccaatcaaattcccccaccttttcacaggaaagagaactcca
tggaggggaatcttgctgtttggacccccaggtactggaaagtcctatttggctaaagct
gttgccacagaggcaaacaactcaacattcttctccatctcctcatctgacctcgtctcc
aaatggctgggagagagtgaaaagctggtgaagaatctcttcaccctcgcaagagagcac
aagccttccatcatcttcattgatgagatcgactccttgtgtggctcaagaagtgagaac
gagagtgaggctgctcgccgtattaagacagagttcctggttcagatgcagggtgtgggg
aatgacaatgacggagtgttggtacttggagcaacaaacatcccttggaccctagactca
gccatcagaagaagatttgagaagaggatttatatcccactgcctgaagagcacgcccgc
tccttcatgttcaagctccacctgggttcgacccctaacagtctcactgactctgatttc
gtcactcttggcaagaagacaaatgggttctcgggagcggatatcagtgtcattgtcaga
gatgctctaatgcagccggttcgaaaagtccagtcagcaacccatttcaaacgggtacga
ggacagtcaagaactgaccctaaagttactgtagatgacctcttggctccttgctcgcct
ggggatcccaacgcgatcgaaatgggatggatggatgtcccaggggagaaactaatggaa
cctatagtgtgcatgtctgacatgatgaggtctctggccaacacaaagccaacagtcaat
gaacaagatctggacaaactgaaaaaattcacagacgactttggacaagaaggctag

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