Megalobrama amblycephala (Wuchang bream): 125248380
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Entry
125248380 CDS
T08212
Symbol
tyw1
Name
(RefSeq) LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125248380 (tyw1)
Enzymes [BR:
mamb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
125248380 (tyw1)
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125248380 (tyw1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
125248380
NCBI-ProteinID:
XP_048016172
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Position
LG16:30562429..30635346
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AA seq
750 aa
AA seq
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MLFLAVFSGLVYSTIGSEMSGVLSDVWDYTESYLLSVWQNRLYVYTTAAVLIGVWFTVNM
LFKKKNVVNPVSPWLYKSVEKQELSPEKEKVIHVSGVKVFYGSQTGTAKGFAKELAEDVS
TQGIQCEVLDMKEYDPDDRLSEECTSKMICVFLVATYTDGQPTESAEWFCKWLEEASTDF
RYGKTYLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDCNVVKSRH
GSVQADFQAWKMKFLSRLQALAKGEKKACSGKCKNGSCKNKKKHKEEAEDSHSLTEKNNS
EEELMESSSDAESSTEEEKSHGSVIDMEDLGNVMNRMKKAKRMEGDEDESQRVKLSKQNG
MRKSESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHRNMIRQFRG
VPGVRPERFEEGLTVKHCALSLVGEPIMYPEINSFLRLLHQQNISSFLVTNAQFPEEIRN
LVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLRALGEKQQRTVYRLTLVKXWNV
DELKAYSDLIALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVVYFVQQLANLLPDYE
IACEHEHSNCLLLAHHKFKVDGEWWTWIDYERFQELIQEYEESGGTKSFSAMDYMAKTPS
WAIFGARERGFDPSDTRFQRKNKTKDISGC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttagcggtgttttcgggtttagtgtattctacaatcggctctgagatgtca
ggtgttttgagtgatgtttgggattacactgagagttacctgctgtctgtgtggcagaac
aggttatatgtgtacactactgctgctgttcttataggagtctggtttactgtcaacatg
cttttcaaaaagaaaaatgtggtcaaccctgtaagtccgtggctgtataaatctgtggaa
aagcaagaactttcacctgaaaaagaaaaagtcattcatgtttctggggtcaaagtcttc
tacggatcacagacaggaaccgcaaagggatttgcaaaagagcttgctgaagacgtcagc
actcaggggatccagtgtgaagttctagatatgaaagagtatgacccagatgacagactg
tctgaggagtgtacaagcaagatgatctgtgtgttcctggtggccacatacactgacgga
cagccgactgagagcgccgaatggttctgtaaatggcttgaggaagcgtccactgacttc
cgatatgggaaaacatatctgaagggaatgagatatgccgtctttgggttggggaactcc
gtttatgtcggccattacaacaccgtcagtaagaacatagataagtggttgtggatgctg
agtgccgcgcggatcatgaccagaggagaaggcgactgcaacgtggtgaagagccgacac
ggcagcgtgcaggccgactttcaggcctggaaaatgaagttcctgagccggctgcaggcc
ctggccaaaggggagaagaaagcctgctctggcaagtgcaagaacggcagctgcaagaac
aagaagaaacataaggaggaggcagaggacagccactcgctcactgagaagaacaactct
gaggaggagctgatggagtccagcagtgatgcagagtcctccactgaggaagagaagtct
catggctctgtcattgacatggaggaccttgggaatgtgatgaatcgtatgaagaaagcc
aagaggatggagggagatgaagatgagtcccagagggtgaagctgtcaaagcagaatgga
atgagaaagagcgagtcagaggaggagcggagagagatgatcactcctgccttgagagat
gctctgactaaacaagggtataaactaataggaagtcactcgggggtaaaactgtgtcgt
tggactaagtcaatgctgagagggagaggaggctgctataaacacaccttctacgggatt
gaatcgcatcgatgtatggagaccacgccgagcctggcctgtgccaacaaatgtgttttc
tgctggagacaccacaccaacccagtgggtactgagtggcgctggaaaatggacccggcc
gagaagatcattcaggaggccgtggagaaccacaggaacatgattcggcaattcagagga
gttccaggcgtgcgtcccgagcgttttgaagagggactcacagtgaagcactgtgctctg
tctctggtgggcgaacccatcatgtatcctgagatcaactcctttctccgactgcttcac
caacagaacatatccagcttcttagtcaccaacgcccagttccctgaggagatcagaaat
cttgtgcctgttacacaactttatgtcagcgttgatgccagcactaaggacagtctgaag
aaaattgaccgtcccctcttcaaagacttctggcagcgctttttggacagtctcagagcg
cttggtgaaaagcaacagcgtacggtgtacagactgaccctggtgaagngctggaatgtg
gatgagctgaaggcctactctgatctcatcgcccttggccagccagatttcatcgaggtc
aagggagtgacgtactgtggcgagagctcagccagtagcctgacaatggccaacgtaccc
tggcacgaggaggtcgtctatttcgtgcagcagctggccaacctgctcccagattatgaa
attgcctgcgaacacgagcactccaattgtctgttacttgcacaccacaagttcaaagtc
gacggggaatggtggacgtggattgactatgagcgcttccaggagctcattcaagaatac
gaggagagcgggggcaccaagagcttctctgcaatggactatatggccaaaacccctagc
tgggccatatttggggcccgagagaggggatttgatccctcggacacacgcttccagaga
aagaataagaccaaagatatctcagggtgttga
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