Megalobrama amblycephala (Wuchang bream): 125277073
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Entry
125277073 CDS
T08212
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
mamb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125277073 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
125277073 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125277073 (mnat1)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125277073 (mnat1)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125277073 (mnat1)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125277073 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-C3HC4
zf-UDP
zf-RING_2
DUF604
TRAF6_Z2
UPF0113_N
zf-P11
Motif
Other DBs
NCBI-GeneID:
125277073
NCBI-ProteinID:
XP_048061257
LinkDB
All DBs
Position
LG10:19968475..20007102
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKREFDFSTLKEYNDYLEQVEDIVFNLTNNVDVERTKQ
IMEQYQRDNRDIIQKNKAKLTREQEELEELLLQEQQDSEQRRLETLQEEQRQLQAKRKNK
QALLDKLESSKLPAAVLLAQHKDRAAQLETQIEKQKQNVKPTNIFSTGIMMGQTVSLASV
SRVEEALYVYQPLYIDTYGPPVPELDQLGRQGYLNHVRTASPQDQAGGYSSGLACHRAIQ
DAFSGLFPL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccagggatgcccgaggtgcaagacgactaaatacagaaatccatctctgaag
ctgatggtcaatgtgtgtggacacacgctgtgcgagagctgtgtggacatgctgtttgtc
cgtggctcaggtaactgtgtgcagtgtaacactcctctcagaaagagtaatttccgcgtg
cagctcttcgaagatccagccatcgacaaagaggtggagatccgaaagaaggttctcaaa
atttataataagagggaatttgatttttccactctgaaagaatataatgactacttggag
caggtggaggatattgtgtttaacctgactaataacgtagatgttgaaaggaccaagcaa
ataatggaacagtaccagcgagataacagagacattatacagaaaaacaaagccaagctg
acacgtgagcaggaggagttggaggagctgttgttacaggagcagcaggattcagagcag
agaagactggagaccctgcaggaagaacagagacaactacaggccaagaggaaaaacaaa
caggcactgctggataaactggagagttccaagttacctgcggctgtgctcttggcccaa
cataaagatcgagccgcccaactggagacccagatagaaaaacagaagcaaaacgtcaaa
ccaacaaacatcttctcaactggaataatgatgggtcagaccgtgtctttggcatctgtg
tctcgtgtggaggaggcattgtacgtctatcagcctctgtacattgacacatacgggcca
cccgttccagaactggatcagttgggccgacaagggtatctgaatcatgtgcgcacagcg
tctcctcaagatcaggctggtggttattcatcaggactggcctgccatcgcgccatccag
gacgctttcagtggcctctttcccttgtga
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