Methylomusa anaerophila: MAMMFC1_03815
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Entry
MAMMFC1_03815 CDS
T05819
Symbol
rny_2
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mana
Methylomusa anaerophila
Pathway
mana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAMMFC1_03815 (rny_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mana03019
]
MAMMFC1_03815 (rny_2)
Messenger RNA biogenesis [BR:
mana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MAMMFC1_03815 (rny_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Ribosomal_S18
KH_2
ApoO
fvmYukDl_N
V-ATPase_G
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
BBB93106
UniProt:
A0A348APV8
LinkDB
All DBs
Position
complement(4124111..4125655)
Genome browser
AA seq
514 aa
AA seq
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MECILEFIITAIIVGLTGAGIGYWIRKNIAEAKIASAEDAARKILDDAEKHGEAKKKEAL
VEAKEEIHKLRSELERETKERRTELQRLERRLVQKEENLDRKIDSLEKKEEILSRKETEL
DKSQEKIDELYAKQLTELERLSGLTSDDARNLLLANVEEEVKHETAMLIKDLEQQAKEEA
DKKAREIISLAIQRCAADHVAETTVSVVALPNDEMKGRIIGREGRNIRTLETLTGIDLII
DDTPEAVILSGFDPVRREVARIALEKLITDGRIHPARIEEMVEKAQKEVEQKIKEAGEQA
TFETGVHGLHPELIKLLGRLRFRTSYGQNVLKHSIEVAHLAGVMAAELGVDVMMAKRAGL
LHDIGKAVDHEVEGPHVTIGADLAKKYREAPEIINAIGAHHGDEEPKTIQAVLVAAADAV
SAARPGARRETLESYLKRLTRLEEIAESFEGVEKSFAIQAGREIRIMVKPEKIDDLSAVR
LVRDIVKKIESELEYPGQIKVTVIRETRAVDYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtggaatgtatactcgagtttataattacagcaattatcgtcggattaactggggctggc
attgggtactggataagaaaaaatattgctgaagctaaaattgcatcagcagaggacgct
gcaagaaaaattcttgacgatgcggaaaaacacggcgaagccaagaaaaaggaagcactg
gtagaagccaaagaagaaatacacaagctcaggagtgaactggagcgcgaaacgaaagag
cgtcgcactgaactgcagcgtttggaacgccggttagtacaaaaagaagaaaatcttgac
cgcaaaatcgattcccttgaaaaaaaggaagagattcttagtcgaaaagagaccgagcta
gataaaagtcaagaaaaaattgatgaattgtatgccaagcaactaacggaattagagcgt
ttatcaggattaacttctgatgatgcgcgaaatttgttactagctaatgttgaggaagaa
gtaaaacatgaaaccgcaatgttgatcaaagaccttgaacagcaagctaaggaagaggca
gataaaaaagcaagagaaattatttctttggctatacaacgttgcgctgcagaccatgtg
gctgaaactaccgtatcggtagtagctttaccgaacgatgaaatgaaaggtcggattatt
gggcgggaaggtcgcaatatccgtactttggagactcttaccggtatcgatcttatcatt
gatgacacgcctgaagcagttatcctgtcggggtttgacccggtacgacgggaagttgcc
agaattgcgctggagaaacttattactgacggacgtattcatcctgcccgtattgaagaa
atggtggaaaaagctcaaaaagaagttgaacagaaaattaaagaagctggtgagcaggct
acttttgaaaccggagttcatgggttacatcctgaactgataaaacttcttggaagactc
aggttccgcacgagctacggccaaaatgtactgaagcactctatagaagttgcccatctc
gcgggagttatggctgccgagctcggagtagatgttatgatggctaaacgggctggatta
ctccacgatattggtaaagcggttgaccatgaagttgagggaccgcatgttactattgga
gctgatttagctaagaaatatcgggaagccccggaaattattaatgctattggtgctcat
cacggcgacgaagaaccaaaaacaatccaagccgtattagtggccgcggcagatgccgta
tcggctgctagaccgggagctcgtcgggaaactctagaaagttatttaaagcgattgaca
cgattggaagaaattgccgagtcattcgaaggtgttgaaaaatcatttgcaatccaggca
ggacgggaaattcgcatcatggtaaaaccggaaaaaatcgatgacttgtctgccgttcgt
ttggttcgcgatatagtaaagaaaatcgaaagtgaacttgaatatcctggccagattaaa
gtaacagttattcgtgaaacccgcgccgtagattacgcaaaataa
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