Massilia antarctica: IV454_24490
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Entry
IV454_24490 CDS
T08186
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
manc
Massilia antarctica
Pathway
manc02010
ABC transporters
manc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
manc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IV454_24490
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IV454_24490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manc02000
]
IV454_24490
Transporters [BR:
manc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IV454_24490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
QPI48657
LinkDB
All DBs
Position
complement(5560026..5561264)
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AA seq
412 aa
AA seq
DB search
MIKTIRPLTLAVSFALLSASAQADTVKIAFIDPLSGPFAPVGQNQLKSFQLIADMASQQK
WAGEHKIEVVGFDNKASPQESLTQLKAVIDQGYRYITQGSGSGVGLALLDAINKHNERNP
GKEVVYLNYAAIDPDMTNSKCSFWHFRFDANSDMKMEALTSYMAPNKDIKSVYIIGQNYA
FGQAVSRAAKEYLKRKRPDIKIAGDDLHPIAQVKDFSPYIAKIKASGADTVITGNWGADL
ALLIRAAKDADLKANFYTYYGITTGVPTAMGAAGAEHVKIVGNWMVNNDKFLGKDIVEAY
KKKYNDDYYAAQTHSGIGMLAQAIKAAKSTDPVKVAFAMEGAKFNSINGEVIMNKADHQL
QQPLFIGTWTKTNGKDVKYDQENTGYGWKMEKKIDAYLANQPTSCQMKRPGT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagactattcgcccgttgacactggctgtatcgtttgcattgctgtcggcgtcg
gcccaggccgataccgtgaagattgccttcatcgaccctctgtccgggcccttcgcgccg
gtcgggcaaaaccagctcaaaagcttccagttgatcgccgatatggcttcccagcaaaag
tgggcgggcgagcacaagatcgaggtggtgggcttcgacaacaaggccagcccgcaggaa
tcgctcacccagctcaaagccgtcatcgaccagggctaccgctacatcacccagggcagc
ggctccggcgtcggcctggccctgctggacgcgatcaacaagcacaacgagcgcaatccc
ggcaaggaagtcgtgtacctgaactatgcggccatcgatccagacatgaccaacagcaag
tgcagcttctggcacttccgcttcgacgccaactccgacatgaaaatggaagccttgacg
tcctatatggcgcccaacaaggacatcaagagtgtctacatcatcggccagaactacgcg
ttcgggcaggccgtcagccgcgccgccaaggaatacctgaaacgcaagcgcccggacatc
aagatcgccggcgacgacctgcacccgatcgcccaggtcaaggatttctcgccctacatc
gccaagatcaaggcttccggcgccgataccgtcatcaccggcaactggggcgccgacctg
gccctgctgatccgcgccgccaaggatgccgacctcaaggccaatttctacacgtactac
ggcattaccacgggcgtgccgaccgccatgggcgcggccggcgccgagcacgtcaagatc
gtcggcaactggatggtcaacaacgacaaattcctcggcaaggatatcgtcgaagcgtac
aagaagaaatacaacgacgattactacgccgcccagacccacagcggcatcggcatgctg
gcccaggccatcaaggcggccaagagcaccgacccggtcaaggtggcgtttgcgatggaa
ggcgccaagttcaacagcatcaacggcgaagtcatcatgaacaaggccgaccaccagctg
cagcaaccactgttcatcggcacctggaccaagaccaacggcaaggatgtcaaatacgac
caggaaaacaccggctacggctggaaaatggaaaagaagatcgacgcctacctggcgaac
cagccgacttcctgccagatgaagcggcccgggacctaa
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